Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 4o1b
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2g96RCSB PDB    PDBbind491aa, >2G96_1|Chains... at 95%
2g97RCSB PDB    PDBbind491aa, >2G97_1|Chains... at 95%
2gvjRCSB PDB    PDBbind491aa, >2GVJ_1|Chains... at 100%
3dkjRCSB PDB    PDBbind484aa, >3DKJ_1|Chains... at 100%
3g8eRCSB PDB    PDBbind491aa, >3G8E_1|Chains... at 95%
4jnmRCSB PDB    PDBbind501aa, >4JNM_1|Chains... *
4jr5RCSB PDB    PDBbind501aa, >4JR5_1|Chains... at 100%
4kfpRCSB PDB    PDBbind501aa, >4KFP_1|Chains... at 100%
4l4lRCSB PDB    PDBbind501aa, >4L4L_1|Chains... at 100%
4l4mRCSB PDB    PDBbind501aa, >4L4M_1|Chains... at 100%
4ltsRCSB PDB    PDBbind501aa, >4LTS_1|Chains... at 100%
4lwwRCSB PDB    PDBbind501aa, >4LWW_1|Chains... at 100%
4m6pRCSB PDB    PDBbind501aa, >4M6P_1|Chains... at 100%
4m6qRCSB PDB    PDBbind501aa, >4M6Q_1|Chains... at 100%
4n9bRCSB PDB    PDBbind501aa, >4N9B_1|Chains... at 100%
4n9cRCSB PDB    PDBbind501aa, >4N9C_1|Chains... at 100%
4n9dRCSB PDB    PDBbind501aa, >4N9D_1|Chains... at 100%
4n9eRCSB PDB    PDBbind501aa, >4N9E_1|Chains... at 100%
4o0zRCSB PDB    PDBbind501aa, >4O0Z_1|Chains... at 100%
4o10RCSB PDB    PDBbind501aa, >4O10_1|Chains... at 100%
4o12RCSB PDB    PDBbind501aa, >4O12_1|Chains... at 100%
4o13RCSB PDB    PDBbind501aa, >4O13_1|Chains... at 100%
4o15RCSB PDB    PDBbind501aa, >4O15_1|Chains... at 99%
4o1dRCSB PDB    PDBbind501aa, >4O1D_1|Chains... at 99%
4o28RCSB PDB    PDBbind501aa, >4O28_1|Chains... at 99%
5kitRCSB PDB    PDBbind491aa, >5KIT_1|Chains... at 100%
5upeRCSB PDB    PDBbind499aa, >5UPE_1|Chains... at 98%
5upfRCSB PDB    PDBbind499aa, >5UPF_1|Chains... at 98%
5wi0RCSB PDB    PDBbind491aa, >5WI0_1|Chains... at 100%
5wi1RCSB PDB    PDBbind491aa, >5WI1_1|Chains... at 100%
6pebRCSB PDB    PDBbind500aa, >6PEB_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2g97RCSB PDB    PDBbindDGB
2gvjRCSB PDB    PDBbindDGB
4o1dRCSB PDB    PDBbindDGB
Entry Information
PDB ID4o1b
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameNicotinamide phosphoribosyltransferase NAMPT (G217R mutant)
Ligand NameDGB
EC.Number E.C.2.4.2.12
Resolution 1.65(Å)
Affinity (Kd/Ki/IC50)IC50=0.385uM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2014) Plos One Vol. 9. e109366: pp.1-12
Ligand Properties
Formula C24H29N3O2
Molecular Weight 391.506
Exact Mass 391.226
No. of atoms 58
No. of bonds 60
Polar Surface Area 62.3
LOGP Value 3.71      (Computed with XLOGP3)
4.26      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 10
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P43490  
Entrez Gene IDNCBI Entrez Gene ID: 10135  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com