Browse entries in the PDBbind-CN Database

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Related entries of code: 4oo9
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5cgcRCSB PDB    PDBbind444aa, >5CGC_1|Chain... at 100%
5cgdRCSB PDB    PDBbind444aa, >5CGD_1|Chain... at 100%
6ffhRCSB PDB    PDBbind444aa, >6FFH_1|Chain... at 100%
6ffiRCSB PDB    PDBbind444aa, >6FFI_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID4oo9
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameMetabotropic glutamate receptor 5, Lysozyme, Metabotropic glutamate receptor 5 chimera
Ligand Name2U8
EC.Number E.C.3.2.1.17
Resolution 2.6(Å)
Affinity (Kd/Ki/IC50)Kd=0.86nM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2014) Nature Vol. 511: pp. 557-562
Ligand Properties
Formula C19H23NO3
Molecular Weight 313.391
Exact Mass 313.168
No. of atoms 46
No. of bonds 48
Polar Surface Area 49.77
LOGP Value 2.85      (Computed with XLOGP3)
2.66      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P41594  P00720  
Entrez Gene IDNCBI Entrez Gene ID: 2915  1258585  
ASDInformation of known allosteric effects of PDB entries

 
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