Browse entries in the PDBbind-CN Database

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Related entries of code: 4zec
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4ra1RCSB PDB    PDBbind499aa, >4RA1_1|Chain... *
4zebRCSB PDB    PDBbind499aa, >4ZEB_1|Chains... at 100%
4zedRCSB PDB    PDBbind499aa, >4ZED_1|Chain... at 100%
4zeiRCSB PDB    PDBbind499aa, >4ZEI_1|Chain... at 100%
4zekRCSB PDB    PDBbind499aa, >4ZEK_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID4zec
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameSe-PBP AccA from A. tumefaciens C58
Ligand NameC84
EC.Number E.C.-.-.-.-
Resolution 2.15(Å)
Affinity (Kd/Ki/IC50)Kd=1.5uM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) Plos Pathog. Vol. 11: pp. e1005071-e1005071
Ligand Properties
Formula C21H36N6O16P2
Molecular Weight 690.489
Exact Mass 690.166
No. of atoms 81
No. of bonds 84
Polar Surface Area 371.36
LOGP Value -5.11      (Computed with XLOGP3)
-4.04      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 9
No. of Hydrogen Bond Acceptors: 15
No. of Rotatable Bonds: 20
No. of Nitrogen and Oxygen Atoms: 22
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q52012  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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