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Related entries of code: 5dj5
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5yz7RCSB PDB    PDBbind274aa, >5YZ7_1|Chains... *
6ap8RCSB PDB    PDBbind269aa, >6AP8_1|Chains... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5dj5
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameProbable strigolactone esterase D14, rice DWARF14
Ligand NameGR2
EC.Number E.C.3.1
Resolution 2.4(Å)
Affinity (Kd/Ki/IC50)IC50=2.5uM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) Cell Res. Vol. 25: pp. 1219-1236
Ligand Properties
Formula C17H14O5
Molecular Weight 298.290
Exact Mass 298.084
No. of atoms 36
No. of bonds 39
Polar Surface Area 61.83
LOGP Value 2.36      (Computed with XLOGP3)
2.39      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q10QA5  
Entrez Gene IDNCBI Entrez Gene ID: 4331983  
ASDInformation of known allosteric effects of PDB entries

 
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