Browse entries in the PDBbind-CN Database

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Related entries of code: 5e0j
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3ur9RCSB PDB    PDBbind188aa, >3UR9_1|Chains... *
4imqRCSB PDB    PDBbind183aa, >4IMQ_1|Chain... at 98%
4imzRCSB PDB    PDBbind183aa, >4IMZ_1|Chain... at 98%
4inhRCSB PDB    PDBbind185aa, >4INH_1|Chains... at 97%
4xbbRCSB PDB    PDBbind188aa, >4XBB_1|Chain... at 100%
4xbdRCSB PDB    PDBbind188aa, >4XBD_1|Chains... at 100%
5dg6RCSB PDB    PDBbind188aa, >5DG6_1|Chains... at 98%
5dgjRCSB PDB    PDBbind188aa, >5DGJ_1|Chain... at 98%
5e0gRCSB PDB    PDBbind188aa, >5E0G_1|Chain... at 98%
5e0hRCSB PDB    PDBbind188aa, >5E0H_1|Chains... at 98%
5t6fRCSB PDB    PDBbind188aa, >5T6F_1|Chains... at 98%
5t6gRCSB PDB    PDBbind188aa, >5T6G_1|Chains... at 98%
5tg1RCSB PDB    PDBbind188aa, >5TG1_1|Chain... at 98%
5tg2RCSB PDB    PDBbind188aa, >5TG2_1|Chain... at 98%
5wejRCSB PDB    PDBbind188aa, >5WEJ_1|Chains... at 98%
6bidRCSB PDB    PDBbind188aa, >6BID_1|Chain... at 98%
6bicRCSB PDB    PDBbind188aa, >6BIC_1|Chains... at 98%
6bibRCSB PDB    PDBbind188aa, >6BIB_1|Chains... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID5e0j
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameNorovirus 3C-like protease
Ligand Name5LJ
EC.Number E.C.3.4.22.66
Resolution 1.2(Å)
Affinity (Kd/Ki/IC50)IC50=6.1uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Eur.J.Med.Chem. Vol. 119: pp. 300-318
Ligand Properties
Formula C33H49N7O6
Molecular Weight 639.785
Exact Mass 639.374
No. of atoms 95
No. of bonds 98
Polar Surface Area 176.57
LOGP Value 3.18      (Computed with XLOGP3)
3.90      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 13
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q83883  
Entrez Gene IDNCBI Entrez Gene ID: 1491970  
ASDInformation of known allosteric effects of PDB entries
 
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