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Related entries of code: 5jog
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5johRCSB PDB    PDBbind257aa, >5JOH_1|Chain... at 100%
5m5qRCSB PDB    PDBbind257aa, >5M5Q_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID5jog
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameCOP9 signalosome complex subunit 5, CSN5(2-257)
Ligand Name6LT
EC.Number E.C. 3.4
Resolution 2.46(Å)
Affinity (Kd/Ki/IC50)IC50=0.0058uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Nat Commun Vol. 7: pp. 13166-13166
Ligand Properties
Formula C28H29F2N5O2
Molecular Weight 505.559
Exact Mass 505.229
No. of atoms 66
No. of bonds 70
Polar Surface Area 84.97
LOGP Value 4.27      (Computed with XLOGP3)
5.88      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q92905  
Entrez Gene IDNCBI Entrez Gene ID: 10987  
ASDInformation of known allosteric effects of PDB entries
 
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