Browse entries in the PDBbind-CN Database

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Related entries of code: 5kau
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5katRCSB PDB    PDBbind165aa, >5KAT_1|Chain... *
5kcbRCSB PDB    PDBbind165aa, >5KCB_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3vvzRCSB PDB    PDBbindRHQ
5kaxRCSB PDB    PDBbindRHQ
Entry Information
PDB ID5kau
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameprotein containing GyrI-like domain SAV2435
Ligand NameRHQ
EC.Number E.C.-.-.-.-
Resolution 1.95(Å)
Affinity (Kd/Ki/IC50)Kd=0.30uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Biochemistry Vol. 55: pp. 4850-4863
Ligand Properties
Formula C28H32N2O3
Molecular Weight 444.565
Exact Mass 444.241
No. of atoms 65
No. of bonds 68
Polar Surface Area 59.59
LOGP Value 6.55      (Computed with XLOGP3)
6.78      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A0A0H3JRN6  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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