Browse entries in the PDBbind-CN Database

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Related entries of code: 5w2p
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4c6uRCSB PDB    PDBbind439aa, >4C6U_1|Chain... *
4c6vRCSB PDB    PDBbind439aa, >4C6V_1|Chain... at 100%
4c6xRCSB PDB    PDBbind439aa, >4C6X_1|Chains... at 99%
4c6zRCSB PDB    PDBbind439aa, >4C6Z_1|Chains... at 99%
4c70RCSB PDB    PDBbind439aa, >4C70_1|Chains... at 99%
4c71RCSB PDB    PDBbind439aa, >4C71_1|Chains... at 99%
4c72RCSB PDB    PDBbind439aa, >4C72_1|Chains... at 99%
4c73RCSB PDB    PDBbind439aa, >4C73_1|Chains... at 99%
5ld8RCSB PDB    PDBbind435aa, >5LD8_1|Chains... at 100%
5w2sRCSB PDB    PDBbind439aa, >5W2S_1|Chain... at 99%
5w2qRCSB PDB    PDBbind439aa, >5W2Q_1|Chain... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5ld8RCSB PDB    PDBbind6U5
5w2qRCSB PDB    PDBbind6U5
Entry Information
PDB ID5w2p
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Name3-oxoacyl-[acyl-carrier-protein] synthase 1
Ligand Name6U5
EC.Number E.C.2.3.1.41
Resolution 2(Å)
Affinity (Kd/Ki/IC50)others=130.9nM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) MBio Vol. 9: pp. -
Ligand Properties
Formula C12H17N3O2S
Molecular Weight 267.347
Exact Mass 267.104
No. of atoms 35
No. of bonds 36
Polar Surface Area 72.37
LOGP Value 1.79      (Computed with XLOGP3)
3.27      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACNo matched UniProt accession number (AC) found!
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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