Browse entries in the PDBbind-CN Database

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Related entries of code: 5w9q
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3qmiRCSB PDB    PDBbind12aa, >3QMI_2|Chains... *
4hp3RCSB PDB    PDBbind12aa, >4HP3_1|Chains... at 100%
4z3cRCSB PDB    PDBbind12aa, >4Z3C_1|Chains... at 100%
5vc9RCSB PDB    PDBbind12aa, >5VC9_1|Chains... at 100%
5w9sRCSB PDB    PDBbind12aa, >5W9S_1|Chains... at 100%
6asbRCSB PDB    PDBbind12aa, >6ASB_1|Chains... at 100%
6cnqRCSB PDB    PDBbind12aa, >6CNQ_2|Chains... at 100%
6cc8RCSB PDB    PDBbind12aa, >6CC8_2|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4z3cRCSB PDB    PDBbindCpG DNA (5-GCCAACGTTGGC-3)
5vc9RCSB PDB    PDBbindCpG DNA (5-GCCAACGTTGGC-3)
5w9sRCSB PDB    PDBbindCpG DNA (5-GCCAACGTTGGC-3)
6asbRCSB PDB    PDBbindCpG DNA (5-GCCAACGTTGGC-3)
6asdRCSB PDB    PDBbindCpG DNA (5-GCCAACGTTGGC-3)
Entry Information
PDB ID5w9q
Complex TypeProtein-Nucleic Acid
PDBbind Subsetgeneral set
Protein NameZinc finger region of MBD1
Ligand NameCpG DNA (5-GCCAACGTTGGC-3)
EC.Number E.C.-.-.-.-
Resolution 1.8(Å)
Affinity (Kd/Ki/IC50)Kd=0.6uM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) Structure Vol. 26: pp. 85-95

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9UIS9  
Entrez Gene IDNCBI Entrez Gene ID: 4152  
ASDInformation of known allosteric effects of PDB entries
 
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