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Related entries of code: 5zee
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5zefRCSB PDB    PDBbind312aa, >5ZEF_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1hqfRCSB PDB    PDBbindHAR
3lp7RCSB PDB    PDBbindHAR
4q3tRCSB PDB    PDBbindHAR

Entry Information
PDB ID5zee
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameArginase
Ligand NameHAR
EC.Number E.C.3.5.3.1
Resolution 1.74(Å)
Affinity (Kd/Ki/IC50)IC50=1.57mM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Febs J. Vol. 286: pp. 4135-4155
Ligand Properties
Formula C6H17N4O3
Molecular Weight 193.224
Exact Mass 193.130
No. of atoms 30
No. of bonds 29
Polar Surface Area 141.78
LOGP Value -4.21      (Computed with XLOGP3)
-3.99      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): C4LSS0  
Entrez Gene IDNCBI Entrez Gene ID: 3411304  
ASDInformation of known allosteric effects of PDB entries

 
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