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Related entries of code: 6bbx
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5umxRCSB PDB    PDBbind140aa, >5UMX_1|Chains... at 100%
5umyRCSB PDB    PDBbind140aa, >5UMY_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6bbx
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameGlyoxalase/bleomycin resisance protein/dioxygenase
Ligand NameD77
EC.Number E.C.-.-.-.-
Resolution 2.2(Å)
Affinity (Kd/Ki/IC50)Kd=215nM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Cell Chem Biol Vol. 25: pp. 1075-1085.e4
Ligand Properties
Formula C29H21NO11
Molecular Weight 559.477
Exact Mass 559.111
No. of atoms 62
No. of bonds 67
Polar Surface Area 206.38
LOGP Value 1.07      (Computed with XLOGP3)
-0.30      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 7
No. of Hydrogen Bond Acceptors: 9
No. of Rotatable Bonds: 10
No. of Nitrogen and Oxygen Atoms: 12
No. of Rings: 6
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A0A125SA29  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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