Browse entries in the PDBbind-CN Database

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Related entries of code: 6e3p
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4avgRCSB PDB    PDBbind204aa, >4AVG_1|Chains... at 97%
4awfRCSB PDB    PDBbind204aa, >4AWF_1|Chains... at 97%
4awgRCSB PDB    PDBbind204aa, >4AWG_1|Chains... at 97%
4awmRCSB PDB    PDBbind192aa, >4AWM_1|Chain... at 96%
4e5fRCSB PDB    PDBbind187aa, >4E5F_1|Chains... at 91%
4e5gRCSB PDB    PDBbind187aa, >4E5G_1|Chains... at 91%
4e5hRCSB PDB    PDBbind187aa, >4E5H_1|Chains... at 91%
4e5iRCSB PDB    PDBbind187aa, >4E5I_1|Chains... at 91%
4e5jRCSB PDB    PDBbind187aa, >4E5J_1|Chains... at 91%
4kilRCSB PDB    PDBbind213aa, >4KIL_1|Chain... at 98%
4ln7RCSB PDB    PDBbind209aa, >4LN7_1|Chain... at 100%
4m4qRCSB PDB    PDBbind241aa, >4M4Q_1|Chain... *
4m5oRCSB PDB    PDBbind241aa, >4M5O_1|Chain... at 100%
4m5rRCSB PDB    PDBbind241aa, >4M5R_1|Chain... at 100%
4m5uRCSB PDB    PDBbind241aa, >4M5U_1|Chain... at 100%
4mk1RCSB PDB    PDBbind241aa, >4MK1_1|Chain... at 100%
4mk2RCSB PDB    PDBbind241aa, >4MK2_1|Chain... at 100%
4mk5RCSB PDB    PDBbind241aa, >4MK5_1|Chain... at 100%
4w9sRCSB PDB    PDBbind241aa, >4W9S_1|Chain... at 100%
5cgvRCSB PDB    PDBbind187aa, >5CGV_1|Chain... at 94%
5egaRCSB PDB    PDBbind187aa, >5EGA_1|Chain... at 94%
5w44RCSB PDB    PDBbind178aa, >5W44_1|Chain... at 98%
5w73RCSB PDB    PDBbind197aa, >5W73_1|Chain... at 93%
5w7uRCSB PDB    PDBbind197aa, >5W7U_1|Chain... at 93%
5w92RCSB PDB    PDBbind197aa, >5W92_1|Chain... at 93%
5w9gRCSB PDB    PDBbind197aa, >5W9G_1|Chain... at 93%
5wa7RCSB PDB    PDBbind197aa, >5WA7_1|Chain... at 93%
5wapRCSB PDB    PDBbind197aa, >5WAP_1|Chain... at 93%
5wb3RCSB PDB    PDBbind197aa, >5WB3_1|Chain... at 93%
5wdcRCSB PDB    PDBbind197aa, >5WDC_1|Chain... at 93%
5wdwRCSB PDB    PDBbind197aa, >5WDW_1|Chain... at 93%
5we9RCSB PDB    PDBbind187aa, >5WE9_1|Chain... at 94%
5webRCSB PDB    PDBbind197aa, >5WEB_1|Chain... at 93%
5wefRCSB PDB    PDBbind187aa, >5WEF_1|Chain... at 93%
5weiRCSB PDB    PDBbind197aa, >5WEI_1|Chain... at 92%
5wf3RCSB PDB    PDBbind197aa, >5WF3_1|Chain... at 92%
5wfmRCSB PDB    PDBbind197aa, >5WFM_1|Chain... at 92%
5wfwRCSB PDB    PDBbind197aa, >5WFW_1|Chain... at 92%
5wfzRCSB PDB    PDBbind197aa, >5WFZ_1|Chain... at 92%
5wg9RCSB PDB    PDBbind197aa, >5WG9_1|Chain... at 92%
6dcyRCSB PDB    PDBbind192aa, >6DCY_1|Chain... at 96%
6dczRCSB PDB    PDBbind192aa, >6DCZ_1|Chain... at 96%
6dzqRCSB PDB    PDBbind192aa, >6DZQ_1|Chain... at 96%
6e0qRCSB PDB    PDBbind192aa, >6E0Q_1|Chain... at 96%
6nemRCSB PDB    PDBbind241aa, >6NEM_1|Chain... at 100%
6nelRCSB PDB    PDBbind241aa, >6NEL_1|Chain... at 100%
6e6wRCSB PDB    PDBbind192aa, >6E6W_1|Chain... at 96%
6e6vRCSB PDB    PDBbind192aa, >6E6V_1|Chain... at 96%
6e4cRCSB PDB    PDBbind192aa, >6E4C_1|Chain... at 96%
6e3nRCSB PDB    PDBbind192aa, >6E3N_1|Chain... at 96%
6e3oRCSB PDB    PDBbind192aa, >6E3O_1|Chain... at 96%
6e3mRCSB PDB    PDBbind192aa, >6E3M_1|Chain... at 96%
5wa6RCSB PDB    PDBbind197aa, >5WA6_1|Chain... at 93%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID6e3p
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePolymerase acidic protein
Ligand NameHO1
EC.Number E.C.-.-.-.-
Resolution 2.8(Å)
Affinity (Kd/Ki/IC50)IC50=2nM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) J.Med.Chem. Vol. 62: pp. 9438-9449
Ligand Properties
Formula C13H9N5O4
Molecular Weight 299.242
Exact Mass 299.065
No. of atoms 31
No. of bonds 33
Polar Surface Area 141.42
LOGP Value 1.47      (Computed with XLOGP3)
-0.89      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 9
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): C3W5S0  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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