Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 6f29
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3s9eRCSB PDB    PDBbind258aa, >3S9E_1|Chains... *
3u92RCSB PDB    PDBbind257aa, >3U92_1|Chains... at 99%
3u93RCSB PDB    PDBbind257aa, >3U93_1|Chains... at 99%
4e0wRCSB PDB    PDBbind258aa, >4E0W_1|Chain... at 100%
4g8nRCSB PDB    PDBbind258aa, >4G8N_1|Chain... at 100%
4igrRCSB PDB    PDBbind258aa, >4IGR_1|Chain... at 100%
4nwcRCSB PDB    PDBbind258aa, >4NWC_1|Chain... at 100%
4nwdRCSB PDB    PDBbind258aa, >4NWD_1|Chain... at 100%
5nf6RCSB PDB    PDBbind258aa, >5NF6_1|Chains... at 100%
5o4fRCSB PDB    PDBbind258aa, >5O4F_1|Chains... at 100%
6f28RCSB PDB    PDBbind258aa, >6F28_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6f29
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namekainate receptor GluK3-LBD
Ligand NameCGW
EC.Number E.C.-.-.-.-
Resolution 2.6(Å)
Affinity (Kd/Ki/IC50)Ki=3.25uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) J. Med. Chem. Vol. 61: pp. 2124-2130
Ligand Properties
Formula C9H10N3O4S
Molecular Weight 256.258
Exact Mass 256.039
No. of atoms 27
No. of bonds 28
Polar Surface Area 148.04
LOGP Value -2.40      (Computed with XLOGP3)
-1.55      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P42264  
Entrez Gene IDNCBI Entrez Gene ID: 298521  
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com