Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 6f5h
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5n9rRCSB PDB    PDBbind357aa, >5N9R_1|Chains... at 97%
5n9tRCSB PDB    PDBbind357aa, >5N9T_1|Chains... at 97%
5ngeRCSB PDB    PDBbind355aa, >5NGE_1|Chains... at 98%
5ngfRCSB PDB    PDBbind355aa, >5NGF_1|Chains... at 98%
5uqvRCSB PDB    PDBbind368aa, >5UQV_1|Chains... at 100%
5uqxRCSB PDB    PDBbind369aa, >5UQX_1|Chains... *
5vs6RCSB PDB    PDBbind353aa, >5VS6_1|Chains... at 98%
5vsbRCSB PDB    PDBbind353aa, >5VSB_1|Chains... at 98%
5vskRCSB PDB    PDBbind353aa, >5VSK_1|Chains... at 98%
5whcRCSB PDB    PDBbind346aa, >5WHC_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6f5h
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameUSP7
Ligand NameCQ5
EC.Number E.C.-.-.-.-
Resolution 2.16(Å)
Affinity (Kd/Ki/IC50)IC50=0.09uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) ACS Med Chem Lett Vol. 9: pp. 238-243
Ligand Properties
Formula C26H38N5O3
Molecular Weight 468.612
Exact Mass 468.297
No. of atoms 72
No. of bonds 75
Polar Surface Area 91.9
LOGP Value 1.59      (Computed with XLOGP3)
2.46      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 11
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q93009  
Entrez Gene IDNCBI Entrez Gene ID: 7874  
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com