Browse entries in the PDBbind-CN Database

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Related entries of code: 6fg6
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4qbmRCSB PDB    PDBbind106aa, >4QBM_1|Chains... *
5mgjRCSB PDB    PDBbind105aa, >5MGJ_1|Chain... at 100%
5mgkRCSB PDB    PDBbind105aa, >5MGK_1|Chain... at 100%
5mglRCSB PDB    PDBbind105aa, >5MGL_1|Chain... at 100%
5mgmRCSB PDB    PDBbind105aa, >5MGM_1|Chain... at 100%
6fgfRCSB PDB    PDBbind105aa, >6FGF_1|Chain... at 100%
6fggRCSB PDB    PDBbind106aa, >6FGG_1|Chain... at 100%
6fglRCSB PDB    PDBbind105aa, >6FGL_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6fh6RCSB PDB    PDBbindD8Q

Entry Information
PDB ID6fg6
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameBAZ2A bromodomain
Ligand NameD8Q
EC.Number E.C.-.-.-.-
Resolution 2.4(Å)
Affinity (Kd/Ki/IC50)Kd=400uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) ChemMedChem Vol. 13: pp. 1479-1487
Ligand Properties
Formula C9H18N3O2
Molecular Weight 200.258
Exact Mass 200.140
No. of atoms 32
No. of bonds 32
Polar Surface Area 77.05
LOGP Value -1.87      (Computed with XLOGP3)
-1.46      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9UIF9  
Entrez Gene IDNCBI Entrez Gene ID: 11176  
ASDInformation of known allosteric effects of PDB entries

 
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