Browse entries in the PDBbind-CN Database

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Related entries of code: 6fgg
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4qbmRCSB PDB    PDBbind106aa, >4QBM_1|Chains... *
5mgjRCSB PDB    PDBbind105aa, >5MGJ_1|Chain... at 100%
5mgkRCSB PDB    PDBbind105aa, >5MGK_1|Chain... at 100%
5mglRCSB PDB    PDBbind105aa, >5MGL_1|Chain... at 100%
5mgmRCSB PDB    PDBbind105aa, >5MGM_1|Chain... at 100%
6fg6RCSB PDB    PDBbind105aa, >6FG6_1|Chain... at 100%
6fgfRCSB PDB    PDBbind105aa, >6FGF_1|Chain... at 100%
6fglRCSB PDB    PDBbind105aa, >6FGL_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6fgg
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameBAZ2A bromodomain
Ligand NameD9B
EC.Number E.C.-.-.-.-
Resolution 1.1(Å)
Affinity (Kd/Ki/IC50)Kd=17uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) ChemMedChem Vol. 13: pp. 1479-1487
Ligand Properties
Formula C18H23N4O4
Molecular Weight 359.400
Exact Mass 359.172
No. of atoms 49
No. of bonds 51
Polar Surface Area 88.99
LOGP Value 0.27      (Computed with XLOGP3)
-0.67      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9UIF9  
Entrez Gene IDNCBI Entrez Gene ID: 11176  
ASDInformation of known allosteric effects of PDB entries

 
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