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Related entries of code: 6g47
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2qwbRCSB PDB    PDBbindSIA
2zg1RCSB PDB    PDBbindSIA
2zg3RCSB PDB    PDBbindSIA
3qndRCSB PDB    PDBbindSIA
4d62RCSB PDB    PDBbindSIA
4d63RCSB PDB    PDBbindSIA
4nrkRCSB PDB    PDBbindSIA
4nrlRCSB PDB    PDBbindSIA
4x11RCSB PDB    PDBbindSIA
6er3RCSB PDB    PDBbindSIA
6er4RCSB PDB    PDBbindSIA
Entry Information
PDB ID6g47
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameDP3
Ligand NameSIA
EC.Number E.C.-.-.-.-
Resolution 1.5(Å)
Affinity (Kd/Ki/IC50)Kd=6.60mM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Proc. Natl. Acad. Sci. U.S.A. Vol. 115: pp. E4264-E4273
Ligand Properties
Formula C22H36N2O17
Molecular Weight 600.524
Exact Mass 600.201
No. of atoms 77
No. of bonds 78
Polar Surface Area 322.33
LOGP Value -4.17      (Computed with XLOGP3)
-5.92      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 10
No. of Hydrogen Bond Acceptors: 14
No. of Rotatable Bonds: 20
No. of Nitrogen and Oxygen Atoms: 19
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A0MK70  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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