Browse entries in the PDBbind-CN Database

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Related entries of code: 6g4y
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4g3eRCSB PDB    PDBbind352aa, >4G3E_1|Chains... *
4g3fRCSB PDB    PDBbind336aa, >4G3F_1|Chain... at 99%
4g3gRCSB PDB    PDBbind350aa, >4G3G_1|Chain... at 95%
5t8oRCSB PDB    PDBbind349aa, >5T8O_1|Chains... at 100%
5t8pRCSB PDB    PDBbind349aa, >5T8P_1|Chains... at 100%
5t8qRCSB PDB    PDBbind349aa, >5T8Q_1|Chains... at 100%
6g4zRCSB PDB    PDBbind349aa, >6G4Z_1|Chains... at 100%
6mynRCSB PDB    PDBbind347aa, >6MYN_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6g4zRCSB PDB    PDBbindELZ

Entry Information
PDB ID6g4y
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameNIK
Ligand NameELZ
EC.Number E.C.-.-.-.-
Resolution 2.65(Å)
Affinity (Kd/Ki/IC50)Ki=1.5nM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) J. Med. Chem. Vol. 61: pp. 6801-6813
Ligand Properties
Formula C25H27N5O6
Molecular Weight 493.512
Exact Mass 493.196
No. of atoms 63
No. of bonds 67
Polar Surface Area 149.01
LOGP Value -0.23      (Computed with XLOGP3)
0.92      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9WUL6  
Entrez Gene IDNCBI Entrez Gene ID: 53859  
ASDInformation of known allosteric effects of PDB entries

 
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