Browse entries in the PDBbind-CN Database

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Related entries of code: 6g4z
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4g3eRCSB PDB    PDBbind352aa, >4G3E_1|Chains... *
4g3fRCSB PDB    PDBbind336aa, >4G3F_1|Chain... at 99%
4g3gRCSB PDB    PDBbind350aa, >4G3G_1|Chain... at 95%
5t8oRCSB PDB    PDBbind349aa, >5T8O_1|Chains... at 100%
5t8pRCSB PDB    PDBbind349aa, >5T8P_1|Chains... at 100%
5t8qRCSB PDB    PDBbind349aa, >5T8Q_1|Chains... at 100%
6g4yRCSB PDB    PDBbind349aa, >6G4Y_1|Chains... at 100%
6mynRCSB PDB    PDBbind347aa, >6MYN_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6g4yRCSB PDB    PDBbindELZ

Entry Information
PDB ID6g4z
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameNIK
Ligand NameELZ
EC.Number E.C.-.-.-.-
Resolution 2.84(Å)
Affinity (Kd/Ki/IC50)Ki=0.17nM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) J. Med. Chem. Vol. 61: pp. 6801-6813
Ligand Properties
Formula C20H16FN5O3
Molecular Weight 393.371
Exact Mass 393.124
No. of atoms 45
No. of bonds 48
Polar Surface Area 114.34
LOGP Value 0.99      (Computed with XLOGP3)
1.24      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9WUL6  
Entrez Gene IDNCBI Entrez Gene ID: 53859  
ASDInformation of known allosteric effects of PDB entries

 
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