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Related entries of code: 6gg3
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1t5aRCSB PDB    PDBbind567aa, >1T5A_1|Chains... *
4b2dRCSB PDB    PDBbind548aa, >4B2D_1|Chains... at 98%
4fxfRCSB PDB    PDBbind551aa, >4FXF_1|Chains... at 98%
4fxjRCSB PDB    PDBbind551aa, >4FXJ_1|Chains... at 98%
6b6uRCSB PDB    PDBbind525aa, >6B6U_1|Chains... at 99%
6gg4RCSB PDB    PDBbind551aa, >6GG4_1|Chains... at 97%
6gg5RCSB PDB    PDBbind551aa, >6GG5_1|Chains... at 97%
6nu5RCSB PDB    PDBbind551aa, >6NU5_1|Chains... at 97%
6nu1RCSB PDB    PDBbind551aa, >6NU1_1|Chains... at 97%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3f48RCSB PDB    PDBbindALA
3ip5RCSB PDB    PDBbindALA
3ipaRCSB PDB    PDBbindALA
4io5RCSB PDB    PDBbindALA
4ykjRCSB PDB    PDBbindALA
6cseRCSB PDB    PDBbindALA
Entry Information
PDB ID6gg3
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePyruvate kinase PKM
Ligand NameALA
EC.Number E.C.-.-.-.-
Resolution 3.72(Å)
Affinity (Kd/Ki/IC50)Ki=62uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Biochem.J. Vol. 475: pp. 1821-1837
Ligand Properties
Formula C3H8NO2
Molecular Weight 90.101
Exact Mass 90.056
No. of atoms 14
No. of bonds 13
Polar Surface Area 64.94
LOGP Value -2.11      (Computed with XLOGP3)
-1.30      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P14618  
Entrez Gene IDNCBI Entrez Gene ID: 5315  
ASDInformation of known allosteric effects of PDB entries
 
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