Browse entries in the PDBbind-CN Database

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Related entries of code: 6pk7
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1wvcRCSB PDB    PDBbindCTP
2ad5RCSB PDB    PDBbindCTP
4wopRCSB PDB    PDBbindCTP
5eomRCSB PDB    PDBbindCTP
6cveRCSB PDB    PDBbindCTP
6e05RCSB PDB    PDBbindCTP
6e06RCSB PDB    PDBbindCTP
6ak6RCSB PDB    PDBbindCTP
Entry Information
PDB ID6pk7
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameCTP synthase 2
Ligand NameCTP
EC.Number E.C.6.3.4.2
Resolution 3.1(Å)
Affinity (Kd/Ki/IC50)IC50=19.2uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2020) Nat.Struct.Mol.Biol. Vol. 27: pp. 42-48
Ligand Properties
Formula C9H20N3O14P3
Molecular Weight 487.188
Exact Mass 487.016
No. of atoms 49
No. of bonds 50
Polar Surface Area 321.92
LOGP Value -5.29      (Computed with XLOGP3)
-3.53      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 10
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 17
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9NRF8  
Entrez Gene IDNCBI Entrez Gene ID: 56474  
ASDInformation of known allosteric effects of PDB entries
 
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