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Related entries of code: 1n4m
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1a3eRCSB PDB    PDBbind18-mer
1guwRCSB PDB    PDBbind18-mer
1l0aRCSB PDB    PDBbind18-mer
1o9kRCSB PDB    PDBbind18-mer
1ov3RCSB PDB    PDBbind18-mer
1pdqRCSB PDB    PDBbind18-mer
2df6RCSB PDB    PDBbind18-mer
2emtRCSB PDB    PDBbind18-mer
2h2dRCSB PDB    PDBbind18-mer
2kbrRCSB PDB    PDBbind18-mer
2knhRCSB PDB    PDBbind18-mer
2kzuRCSB PDB    PDBbind18-mer
2l8jRCSB PDB    PDBbind18-mer
2lp8RCSB PDB    PDBbind18-mer
2rvnRCSB PDB    PDBbind18-mer
2vpgRCSB PDB    PDBbind18-mer
2xs8RCSB PDB    PDBbind18-mer
2y9qRCSB PDB    PDBbind18-mer
3c3qRCSB PDB    PDBbind18-mer
3cfvRCSB PDB    PDBbind18-mer
3iswRCSB PDB    PDBbind18-mer
3iuxRCSB PDB    PDBbind18-mer
3kl8RCSB PDB    PDBbind18-mer
3l6xRCSB PDB    PDBbind18-mer
3pdhRCSB PDB    PDBbind18-mer
3rtxRCSB PDB    PDBbind18-mer
3uatRCSB PDB    PDBbind18-mer
3v31RCSB PDB    PDBbind18-mer
3v43RCSB PDB    PDBbind18-mer
4aomRCSB PDB    PDBbind18-mer
4ejfRCSB PDB    PDBbind18-mer
4glrRCSB PDB    PDBbind18-mer
4jk5RCSB PDB    PDBbind18-mer
4jk6RCSB PDB    PDBbind18-mer
4mzlRCSB PDB    PDBbind18-mer
4pn1RCSB PDB    PDBbind18-mer
4pz8RCSB PDB    PDBbind18-mer
4risRCSB PDB    PDBbind18-mer
4rqiRCSB PDB    PDBbind18-mer
4wrqRCSB PDB    PDBbind18-mer
4xh2RCSB PDB    PDBbind18-mer
5b4wRCSB PDB    PDBbind18-mer
5e2vRCSB PDB    PDBbind18-mer
5e2wRCSB PDB    PDBbind18-mer
5jekRCSB PDB    PDBbind18-mer
5mk1RCSB PDB    PDBbind18-mer
5mk3RCSB PDB    PDBbind18-mer
5odsRCSB PDB    PDBbind18-mer
5sveRCSB PDB    PDBbind18-mer
5t90RCSB PDB    PDBbind18-mer
5uwiRCSB PDB    PDBbind18-mer
5v3rRCSB PDB    PDBbind18-mer
5wa1RCSB PDB    PDBbind18-mer
5xyfRCSB PDB    PDBbind18-mer
5yc2RCSB PDB    PDBbind18-mer
5yv5RCSB PDB    PDBbind18-mer
6bhdRCSB PDB    PDBbind18-mer
6bheRCSB PDB    PDBbind18-mer
6bhhRCSB PDB    PDBbind18-mer
6h41RCSB PDB    PDBbind18-mer
6jjzRCSB PDB    PDBbind18-mer
6iqgRCSB PDB    PDBbind18-mer
6esaRCSB PDB    PDBbind18-mer
6erwRCSB PDB    PDBbind18-mer
6ervRCSB PDB    PDBbind18-mer
6eruRCSB PDB    PDBbind18-mer
6em7RCSB PDB    PDBbind18-mer
6em6RCSB PDB    PDBbind18-mer
6eh2RCSB PDB    PDBbind18-mer
6egwRCSB PDB    PDBbind18-mer
5y53RCSB PDB    PDBbind18-mer
5szcRCSB PDB    PDBbind18-mer
5szbRCSB PDB    PDBbind18-mer
5ousRCSB PDB    PDBbind18-mer
5ouaRCSB PDB    PDBbind18-mer
5ol3RCSB PDB    PDBbind18-mer
5ok3RCSB PDB    PDBbind18-mer
5o0eRCSB PDB    PDBbind18-mer
5nw8RCSB PDB    PDBbind18-mer
6emaRCSB PDB    PDBbind18-mer
6senRCSB PDB    PDBbind18-mer
6seoRCSB PDB    PDBbind18-mer
Entry Information
PDB ID1n4m
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameretinoblastoma (Rb)
Ligand Name18-mer
EC.Number E.C.-.-.-.-
Resolution 2.2(Å)
Affinity (Kd/Ki/IC50)Kd=0.19uM
Release Year2003
Protein/NA SequenceCheck fasta file
Primary Reference (2002) GENES DEV. Vol. 16: pp. 3199-3212
Ligand Properties
Formula C91H128N19O33
Molecular Weight 2016.100
Exact Mass 2014.890
No. of atoms 271
No. of bonds 274
Polar Surface Area 839.69
LOGP Value 5.31      (Computed with XLOGP3)
0.20      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 21
No. of Hydrogen Bond Acceptors: 33
No. of Rotatable Bonds: 76
No. of Nitrogen and Oxygen Atoms: 52
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q14209  P06400  
Entrez Gene IDNCBI Entrez Gene ID: 1870  5925  
ASDInformation of known allosteric effects of PDB entries
 
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