Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 1p93
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1osvRCSB PDB    PDBbind12aa, >1OSV_2|Chains... at 100%
1t63RCSB PDB    PDBbind14aa, >1T63_2|Chain... at 100%
2ao6RCSB PDB    PDBbind25aa, >2AO6_2|Chain... *
3k22RCSB PDB    PDBbind12aa, >3K22_2|Chains... at 100%
3k23RCSB PDB    PDBbind12aa, >3K23_2|Chains... at 100%
3l0eRCSB PDB    PDBbind12aa, >3L0E_2|Chain... at 100%
4csjRCSB PDB    PDBbind13aa, >4CSJ_2|Chain... at 100%
4p6wRCSB PDB    PDBbind12aa, >4P6W_2|Chain... at 91%
4p6xRCSB PDB    PDBbind14aa, >4P6X_2|Chains... at 100%
5h1eRCSB PDB    PDBbind13aa, >5H1E_2|Chain... at 100%
5ickRCSB PDB    PDBbind11aa, >5ICK_2|Chains... at 100%
5q17RCSB PDB    PDBbind12aa, >5Q17_2|Chain... at 100%
5xplRCSB PDB    PDBbind13aa, >5XPL_2|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4udaRCSB PDB    PDBbindDEX
6nwkRCSB PDB    PDBbindDEX
Entry Information
PDB ID1p93
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namehuman glucocorticoid receptor ligand-binding domain and a TIF2 coactivator motif
Ligand NameDEX
EC.Number E.C.-.-.-.-
Resolution 2.7(Å)
Affinity (Kd/Ki/IC50)Kd=19nM
Release Year2003
Protein/NA SequenceCheck fasta file
Primary Reference (2010) J. Med. Chem., Vol.53, pp.3349-3360
Ligand Properties
Formula C22H29FO5
Molecular Weight 392.461
Exact Mass 392.200
No. of atoms 57
No. of bonds 60
Polar Surface Area 94.83
LOGP Value 2.04      (Computed with XLOGP3)
1.90      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q15596  P04150  
Entrez Gene IDNCBI Entrez Gene ID: 10499  2908  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com