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Related entries of code: 1rtl
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2a4gRCSB PDB    PDBbind23aa, >2A4G_2|Chains... at 100%
2a4qRCSB PDB    PDBbind23aa, >2A4Q_2|Chains... at 100%
2a4rRCSB PDB    PDBbind23aa, >2A4R_2|Chains... at 100%
2f9uRCSB PDB    PDBbind23aa, >2F9U_2|Chains... at 100%
2f9vRCSB PDB    PDBbind23aa, >2F9V_2|Chains... at 100%
2fm2RCSB PDB    PDBbind23aa, >2FM2_2|Chains... at 100%
2gvfRCSB PDB    PDBbind23aa, >2GVF_2|Chains... at 100%
2oboRCSB PDB    PDBbind23aa, >2OBO_2|Chains... at 100%
2oc0RCSB PDB    PDBbind23aa, >2OC0_2|Chains... at 100%
2oc1RCSB PDB    PDBbind23aa, >2OC1_2|Chains... at 100%
2oc7RCSB PDB    PDBbind23aa, >2OC7_2|Chains... at 100%
2oinRCSB PDB    PDBbind21aa, >2OIN_2|Chains... at 95%
2p59RCSB PDB    PDBbind21aa, >2P59_2|Chains... at 95%
2xcnRCSB PDB    PDBbind23aa, >2XCN_2|Chains... at 100%
2xniRCSB PDB    PDBbind23aa, >2XNI_2|Chains... at 100%
3eydRCSB PDB    PDBbind23aa, >3EYD_2|Chains... at 100%
3loxRCSB PDB    PDBbind23aa, >3LOX_2|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID1rtl
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namens3 protease/helicase
Ligand NameCPX
EC.Number E.C.-.-.-.-
Resolution 2.75(Å)
Affinity (Kd/Ki/IC50)IC50=2.6uM
Release Year2004
Protein/NA SequenceCheck fasta file
Primary Reference Org.Lett. v5 pp. 4627-30, 2003
Ligand Properties
Formula C24H38N4O4
Molecular Weight 446.583
Exact Mass 446.289
No. of atoms 70
No. of bonds 73
Polar Surface Area 107.61
LOGP Value 1.89      (Computed with XLOGP3)
3.23      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 12
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): O39914  P26664  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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