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Related entries of code: 2gvf
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1rtlRCSB PDB    PDBbind23aa, >1RTL_2|Chains... *
2a4gRCSB PDB    PDBbind23aa, >2A4G_2|Chains... at 100%
2a4qRCSB PDB    PDBbind23aa, >2A4Q_2|Chains... at 100%
2a4rRCSB PDB    PDBbind23aa, >2A4R_2|Chains... at 100%
2f9uRCSB PDB    PDBbind23aa, >2F9U_2|Chains... at 100%
2f9vRCSB PDB    PDBbind23aa, >2F9V_2|Chains... at 100%
2fm2RCSB PDB    PDBbind23aa, >2FM2_2|Chains... at 100%
2oboRCSB PDB    PDBbind23aa, >2OBO_2|Chains... at 100%
2oc0RCSB PDB    PDBbind23aa, >2OC0_2|Chains... at 100%
2oc1RCSB PDB    PDBbind23aa, >2OC1_2|Chains... at 100%
2oc7RCSB PDB    PDBbind23aa, >2OC7_2|Chains... at 100%
2oinRCSB PDB    PDBbind21aa, >2OIN_2|Chains... at 95%
2p59RCSB PDB    PDBbind21aa, >2P59_2|Chains... at 95%
2xcnRCSB PDB    PDBbind23aa, >2XCN_2|Chains... at 100%
2xniRCSB PDB    PDBbind23aa, >2XNI_2|Chains... at 100%
3eydRCSB PDB    PDBbind23aa, >3EYD_2|Chains... at 100%
3loxRCSB PDB    PDBbind23aa, >3LOX_2|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID2gvf
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameNS3-4A serine protease
Ligand NameNHN
EC.Number E.C.-.-.-.-
Resolution 2.5(Å)
Affinity (Kd/Ki/IC50)Ki=25nM
Release Year2007
Protein/NA SequenceCheck fasta file
Primary Reference Bioorg. Med. Chem. Lett. 2006, 16, 3960-3965.
Ligand Properties
Formula C42H58N6O9
Molecular Weight 790.945
Exact Mass 790.427
No. of atoms 115
No. of bonds 119
Polar Surface Area 195.71
LOGP Value 3.12      (Computed with XLOGP3)
3.21      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 17
No. of Nitrogen and Oxygen Atoms: 15
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P26664  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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