Browse entries in the PDBbind-CN Database

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Related entries of code: 3eyd
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1rtlRCSB PDB    PDBbind23aa, >1RTL_2|Chains... *
2a4gRCSB PDB    PDBbind23aa, >2A4G_2|Chains... at 100%
2a4qRCSB PDB    PDBbind23aa, >2A4Q_2|Chains... at 100%
2a4rRCSB PDB    PDBbind23aa, >2A4R_2|Chains... at 100%
2f9uRCSB PDB    PDBbind23aa, >2F9U_2|Chains... at 100%
2f9vRCSB PDB    PDBbind23aa, >2F9V_2|Chains... at 100%
2fm2RCSB PDB    PDBbind23aa, >2FM2_2|Chains... at 100%
2gvfRCSB PDB    PDBbind23aa, >2GVF_2|Chains... at 100%
2oboRCSB PDB    PDBbind23aa, >2OBO_2|Chains... at 100%
2oc0RCSB PDB    PDBbind23aa, >2OC0_2|Chains... at 100%
2oc1RCSB PDB    PDBbind23aa, >2OC1_2|Chains... at 100%
2oc7RCSB PDB    PDBbind23aa, >2OC7_2|Chains... at 100%
2oinRCSB PDB    PDBbind21aa, >2OIN_2|Chains... at 95%
2p59RCSB PDB    PDBbind21aa, >2P59_2|Chains... at 95%
2xcnRCSB PDB    PDBbind23aa, >2XCN_2|Chains... at 100%
2xniRCSB PDB    PDBbind23aa, >2XNI_2|Chains... at 100%
3loxRCSB PDB    PDBbind23aa, >3LOX_2|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID3eyd
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameHCV NS3-4A Protease
Ligand NameBE8
EC.Number E.C.-.-.-.-
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)Ki=0.2nM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2009) Bioorg.Med.Chem.Lett. Vol. 19: pp. 180-183
Ligand Properties
Formula C29H56BN5O7S
Molecular Weight 629.660
Exact Mass 629.399
No. of atoms 99
No. of bonds 101
Polar Surface Area 154.76
LOGP Value 3.39      (Computed with XLOGP3)
3.25      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 17
No. of Nitrogen and Oxygen Atoms: 12
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P26664  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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