Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 2e94
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2e91RCSB PDB    PDBbind340aa, >2E91_1|Chains... *
2e92RCSB PDB    PDBbind340aa, >2E92_1|Chains... at 100%
2e93RCSB PDB    PDBbind340aa, >2E93_1|Chains... at 100%
2e95RCSB PDB    PDBbind340aa, >2E95_1|Chains... at 100%
2z4wRCSB PDB    PDBbind340aa, >2Z4W_1|Chains... at 100%
2z4yRCSB PDB    PDBbind340aa, >2Z4Y_1|Chains... at 100%
2z4zRCSB PDB    PDBbind340aa, >2Z4Z_1|Chains... at 100%
2z50RCSB PDB    PDBbind340aa, >2Z50_1|Chains... at 100%
2z52RCSB PDB    PDBbind340aa, >2Z52_1|Chains... at 100%
2z78RCSB PDB    PDBbind340aa, >2Z78_1|Chains... at 100%
2z7hRCSB PDB    PDBbind340aa, >2Z7H_1|Chains... at 100%
2z7iRCSB PDB    PDBbind340aa, >2Z7I_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID2e94
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameGeranylgeranyl pyrophosphate synthetase
Ligand Name364
EC.Number E.C.2.5.1.30
Resolution 2.18(Å)
Affinity (Kd/Ki/IC50)Ki=0.01uM
Release Year2007
Protein/NA SequenceCheck fasta file
Primary Reference PNAS. 2007, 104, 10022-10027.
Ligand Properties
Formula C19H22NO7P2
Molecular Weight 438.328
Exact Mass 438.087
No. of atoms 51
No. of bonds 53
Polar Surface Area 172.67
LOGP Value -0.41      (Computed with XLOGP3)
1.43      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q12051  
Entrez Gene IDNCBI Entrez Gene ID: 856036  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com