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Related entries of code: 2e93
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2e91RCSB PDB    PDBbind340aa, >2E91_1|Chains... *
2e92RCSB PDB    PDBbind340aa, >2E92_1|Chains... at 100%
2e94RCSB PDB    PDBbind340aa, >2E94_1|Chains... at 100%
2e95RCSB PDB    PDBbind340aa, >2E95_1|Chains... at 100%
2z4wRCSB PDB    PDBbind340aa, >2Z4W_1|Chains... at 100%
2z4yRCSB PDB    PDBbind340aa, >2Z4Y_1|Chains... at 100%
2z4zRCSB PDB    PDBbind340aa, >2Z4Z_1|Chains... at 100%
2z50RCSB PDB    PDBbind340aa, >2Z50_1|Chains... at 100%
2z52RCSB PDB    PDBbind340aa, >2Z52_1|Chains... at 100%
2z78RCSB PDB    PDBbind340aa, >2Z78_1|Chains... at 100%
2z7hRCSB PDB    PDBbind340aa, >2Z7H_1|Chains... at 100%
2z7iRCSB PDB    PDBbind340aa, >2Z7I_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2e98RCSB PDB    PDBbindB29
3wqmRCSB PDB    PDBbindB29
4w4sRCSB PDB    PDBbindB29
5zlfRCSB PDB    PDBbindB29
Entry Information
PDB ID2e93
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameGeranylgeranyl pyrophosphate synthetase
Ligand NameB29
EC.Number E.C.2.5.1.30
Resolution 2.12(Å)
Affinity (Kd/Ki/IC50)Ki=0.11uM
Release Year2007
Protein/NA SequenceCheck fasta file
Primary Reference PNAS. 2007, 104, 10022-10027.
Ligand Properties
Formula C20H20O8P2
Molecular Weight 450.316
Exact Mass 450.063
No. of atoms 50
No. of bonds 53
Polar Surface Area 181.93
LOGP Value 0.97      (Computed with XLOGP3)
2.92      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q12051  
Entrez Gene IDNCBI Entrez Gene ID: 856036  
ASDInformation of known allosteric effects of PDB entries
 
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