Browse entries in the PDBbind-CN Database

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Related entries of code: 2g78
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2cbsRCSB PDB    PDBbind137aa, >2CBS_1|Chain... at 100%
2fr3RCSB PDB    PDBbind137aa, >2FR3_1|Chain... at 100%
2g79RCSB PDB    PDBbind137aa, >2G79_1|Chain... at 98%
3cbsRCSB PDB    PDBbind137aa, >3CBS_1|Chain... at 100%
3cwkRCSB PDB    PDBbind137aa, >3CWK_1|Chain... at 96%
4i9rRCSB PDB    PDBbind137aa, >4I9R_1|Chain... at 95%
4i9sRCSB PDB    PDBbind137aa, >4I9S_1|Chain... at 96%
5ogbRCSB PDB    PDBbind138aa, >5OGB_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1cbrRCSB PDB    PDBbindREA
1n4hRCSB PDB    PDBbindREA
1tyrRCSB PDB    PDBbindREA
2fr3RCSB PDB    PDBbindREA
3cwkRCSB PDB    PDBbindREA
Entry Information
PDB ID2g78
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameCellular retinoic acid-binding protein 2
Ligand NameREA
EC.Number E.C.-.-.-.-
Resolution 1.7(Å)
Affinity (Kd/Ki/IC50)Kd=120nM
Release Year2007
Protein/NA SequenceCheck fasta file
Primary Reference J. Am. Chem. Soc. 2007, 129, 6142-6148.
Ligand Properties
Formula C20H30O2
Molecular Weight 302.451
Exact Mass 302.225
No. of atoms 52
No. of bonds 52
Polar Surface Area 37.3
LOGP Value 7.18      (Computed with XLOGP3)
5.83      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 2
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P29373  
Entrez Gene IDNCBI Entrez Gene ID: 1382  
ASDInformation of known allosteric effects of PDB entries
 
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