Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 2wky
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1vsoRCSB PDB    PDBbind257aa, >1VSO_1|Chain... at 99%
2f34RCSB PDB    PDBbind258aa, >2F34_1|Chains... *
2f35RCSB PDB    PDBbind258aa, >2F35_1|Chains... at 100%
2pbwRCSB PDB    PDBbind257aa, >2PBW_1|Chains... at 99%
2znsRCSB PDB    PDBbind256aa, >2ZNS_1|Chain... at 98%
2zntRCSB PDB    PDBbind256aa, >2ZNT_1|Chain... at 98%
2znuRCSB PDB    PDBbind256aa, >2ZNU_1|Chain... at 98%
3fuzRCSB PDB    PDBbind256aa, >3FUZ_1|Chains... at 98%
3fv1RCSB PDB    PDBbind256aa, >3FV1_1|Chains... at 98%
3fv2RCSB PDB    PDBbind256aa, >3FV2_1|Chains... at 98%
3fvgRCSB PDB    PDBbind256aa, >3FVG_1|Chains... at 98%
3fvkRCSB PDB    PDBbind256aa, >3FVK_1|Chains... at 98%
3fvnRCSB PDB    PDBbind256aa, >3FVN_1|Chains... at 98%
3gbaRCSB PDB    PDBbind257aa, >3GBA_1|Chains... at 99%
3gbbRCSB PDB    PDBbind257aa, >3GBB_1|Chains... at 99%
3s2vRCSB PDB    PDBbind257aa, >3S2V_1|Chains... at 99%
4dldRCSB PDB    PDBbind257aa, >4DLD_1|Chains... at 99%
4e0xRCSB PDB    PDBbind257aa, >4E0X_1|Chains... at 99%
4qf9RCSB PDB    PDBbind257aa, >4QF9_1|Chains... at 99%
4ymbRCSB PDB    PDBbind257aa, >4YMB_1|Chains... at 99%
5m2vRCSB PDB    PDBbind257aa, >5M2V_1|Chains... at 99%
5nebRCSB PDB    PDBbind257aa, >5NEB_1|Chains... at 99%
5nf5RCSB PDB    PDBbind257aa, >5NF5_1|Chains... at 99%
6fz4RCSB PDB    PDBbind257aa, >6FZ4_1|Chain... at 99%
6sbtRCSB PDB    PDBbind257aa, >6SBT_1|Chain... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1wvjRCSB PDB    PDBbindIBC
Entry Information
PDB ID2wky
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameGlutamate receptor, ionotropic kainate 1
Ligand NameIBC
EC.Number E.C.-.-.-.-
Resolution 2.2(Å)
Affinity (Kd/Ki/IC50)Ki=2.57nM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2009) J.Med.Chem.
Ligand Properties
Formula C11H15N2O4
Molecular Weight 239.248
Exact Mass 239.103
No. of atoms 32
No. of bonds 33
Polar Surface Area 103.27
LOGP Value -1.98      (Computed with XLOGP3)
-0.52      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P22756  
Entrez Gene IDNCBI Entrez Gene ID: 29559  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com