Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 3bl2
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2p1lRCSB PDB    PDBbind31aa, >2P1L_2|Chains... *
2ponRCSB PDB    PDBbind23aa, >2PON_1|Chain... at 95%
3dvuRCSB PDB    PDBbind26aa, >3DVU_2|Chains... at 92%
4mi8RCSB PDB    PDBbind26aa, >4MI8_2|Chains... at 92%
6dcnRCSB PDB    PDBbind26aa, >6DCN_2|Chains... at 92%
6tzcRCSB PDB    PDBbind26aa, >6TZC_3|Chain... at 92%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1dvaRCSB PDB    PDBbind19-mer
1idgRCSB PDB    PDBbind19-mer
1ilqRCSB PDB    PDBbind19-mer
1iwqRCSB PDB    PDBbind19-mer
1katRCSB PDB    PDBbind19-mer
1lxhRCSB PDB    PDBbind19-mer
1oqpRCSB PDB    PDBbind19-mer
2asuRCSB PDB    PDBbind19-mer
2jqkRCSB PDB    PDBbind19-mer
2k7lRCSB PDB    PDBbind19-mer
2kupRCSB PDB    PDBbind19-mer
2lloRCSB PDB    PDBbind19-mer
2llqRCSB PDB    PDBbind19-mer
2nd0RCSB PDB    PDBbind19-mer
2pl9RCSB PDB    PDBbind19-mer
2rquRCSB PDB    PDBbind19-mer
2yq6RCSB PDB    PDBbind19-mer
3bimRCSB PDB    PDBbind19-mer
3bu8RCSB PDB    PDBbind19-mer
3eu7RCSB PDB    PDBbind19-mer
3h52RCSB PDB    PDBbind19-mer
3pluRCSB PDB    PDBbind19-mer
3q6sRCSB PDB    PDBbind19-mer
3qnjRCSB PDB    PDBbind19-mer
3tiwRCSB PDB    PDBbind19-mer
3tzdRCSB PDB    PDBbind19-mer
3uvuRCSB PDB    PDBbind19-mer
3v2oRCSB PDB    PDBbind19-mer
3v7dRCSB PDB    PDBbind19-mer
3zhaRCSB PDB    PDBbind19-mer
4a1wRCSB PDB    PDBbind19-mer
4bpiRCSB PDB    PDBbind19-mer
4bpjRCSB PDB    PDBbind19-mer
4hpyRCSB PDB    PDBbind19-mer
4j24RCSB PDB    PDBbind19-mer
4mzjRCSB PDB    PDBbind19-mer
4mzkRCSB PDB    PDBbind19-mer
4oykRCSB PDB    PDBbind19-mer
4qxtRCSB PDB    PDBbind19-mer
4qy8RCSB PDB    PDBbind19-mer
4tknRCSB PDB    PDBbind19-mer
4xekRCSB PDB    PDBbind19-mer
4xgzRCSB PDB    PDBbind19-mer
4z8mRCSB PDB    PDBbind19-mer
5bjtRCSB PDB    PDBbind19-mer
5ekgRCSB PDB    PDBbind19-mer
5f67RCSB PDB    PDBbind19-mer
5gmiRCSB PDB    PDBbind19-mer
5gmjRCSB PDB    PDBbind19-mer
5gowRCSB PDB    PDBbind19-mer
5jeoRCSB PDB    PDBbind19-mer
5jerRCSB PDB    PDBbind19-mer
5k6sRCSB PDB    PDBbind19-mer
5mavRCSB PDB    PDBbind19-mer
5nxqRCSB PDB    PDBbind19-mer
5uw5RCSB PDB    PDBbind19-mer
5uwpRCSB PDB    PDBbind19-mer
5v2pRCSB PDB    PDBbind19-mer
5v2qRCSB PDB    PDBbind19-mer
5ybeRCSB PDB    PDBbind19-mer
6bvbRCSB PDB    PDBbind19-mer
6fkqRCSB PDB    PDBbind19-mer
6milRCSB PDB    PDBbind19-mer
6r8iRCSB PDB    PDBbind19-mer
6oieRCSB PDB    PDBbind19-mer
6h8cRCSB PDB    PDBbind19-mer
5v5oRCSB PDB    PDBbind19-mer
5j7jRCSB PDB    PDBbind19-mer
Entry Information
PDB ID3bl2
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameM11, the BCL-2 Homolog of Murine Gamma-herpesvirus 68
Ligand Name19-mer
EC.Number E.C.-.-.-.-
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)Kd=1580nM
Release Year2008
Protein/NA SequenceCheck fasta file
Primary Reference (2008) Plos Pathog. Vol. 4: pp. e25-e25
Ligand Properties
Formula C96H167N27O30S2
Molecular Weight 2243.650
Exact Mass 2242.180
No. of atoms 322
No. of bonds 322
Polar Surface Area 1014.68
LOGP Value -0.39      (Computed with XLOGP3)
-3.71      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 24
No. of Hydrogen Bond Acceptors: 30
No. of Rotatable Bonds: 95
No. of Nitrogen and Oxygen Atoms: 57
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P89884  O88597  
Entrez Gene IDNCBI Entrez Gene ID: 1497180  56208  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2025    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com