Browse entries in the PDBbind-CN Database

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Related entries of code: 3ijh
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1himRCSB PDB    PDBbind217aa, >1HIM_1|Chains... at 91%
2r1wRCSB PDB    PDBbind219aa, >2R1W_1|Chain... at 94%
2r1xRCSB PDB    PDBbind219aa, >2R1X_1|Chain... at 94%
2r1yRCSB PDB    PDBbind219aa, >2R1Y_1|Chain... at 94%
2r23RCSB PDB    PDBbind219aa, >2R23_1|Chain... at 94%
2r2bRCSB PDB    PDBbind219aa, >2R2B_1|Chain... at 94%
3bpcRCSB PDB    PDBbind219aa, >3BPC_1|Chain... at 94%
3hzkRCSB PDB    PDBbind219aa, >3HZK_1|Chain... at 94%
3hzmRCSB PDB    PDBbind219aa, >3HZM_1|Chain... at 94%
3hzvRCSB PDB    PDBbind219aa, >3HZV_1|Chain... at 94%
3hzyRCSB PDB    PDBbind219aa, >3HZY_1|Chain... at 94%
3i02RCSB PDB    PDBbind219aa, >3I02_1|Chains... at 94%
3ijyRCSB PDB    PDBbind218aa, >3IJY_1|Chains... at 94%
3ikcRCSB PDB    PDBbind218aa, >3IKC_1|Chains... at 94%
5kvdRCSB PDB    PDBbind220aa, >5KVD_2|Chain... at 91%
5kvfRCSB PDB    PDBbind220aa, >5KVF_2|Chain... at 91%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID3ijh
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namepromiscuous mAb S67-27
Ligand NameKO2
EC.Number E.C.-.-.-.-
Resolution 2.1(Å)
Affinity (Kd/Ki/IC50)Kd=100uM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2010) Glycobiology Vol. 20: pp. 138-147
Ligand Properties
Formula C11H20O9
Molecular Weight 296.271
Exact Mass 296.111
No. of atoms 40
No. of bonds 40
Polar Surface Area 156.91
LOGP Value -0.96      (Computed with XLOGP3)
-2.97      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 10
No. of Nitrogen and Oxygen Atoms: 9
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACNo matched UniProt accession number (AC) found!
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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