Browse entries in the PDBbind-CN Database

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Related entries of code: 3l0n
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2qcdRCSB PDB    PDBbind260aa, >2QCD_2|Chain... at 98%
2qcfRCSB PDB    PDBbind260aa, >2QCF_1|Chain... at 98%
2qcgRCSB PDB    PDBbind260aa, >2QCG_1|Chains... at 98%
2qchRCSB PDB    PDBbind260aa, >2QCH_1|Chains... at 98%
2qcmRCSB PDB    PDBbind260aa, >2QCM_1|Chain... at 98%
2qcnRCSB PDB    PDBbind260aa, >2QCN_1|Chains... at 98%
3ewuRCSB PDB    PDBbind260aa, >3EWU_1|Chains... at 98%
3ewzRCSB PDB    PDBbind260aa, >3EWZ_1|Chains... at 98%
3ex2RCSB PDB    PDBbind260aa, >3EX2_1|Chains... at 98%
3ex3RCSB PDB    PDBbind260aa, >3EX3_1|Chains... at 98%
3ex6RCSB PDB    PDBbind260aa, >3EX6_1|Chains... at 98%
3g3dRCSB PDB    PDBbind312aa, >3G3D_1|Chains... *
3g3mRCSB PDB    PDBbind279aa, >3G3M_1|Chain... at 92%
3l0kRCSB PDB    PDBbind260aa, >3L0K_1|Chains... at 98%
3mi2RCSB PDB    PDBbind279aa, >3MI2_1|Chains... at 92%
4hkpRCSB PDB    PDBbind312aa, >4HKP_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID3l0n
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameUridine 5-monophosphate synthase
Ligand NameS5P
EC.Number E.C.4.1.1.23
Resolution 1.75(Å)
Affinity (Kd/Ki/IC50)IC50=1680uM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2009) Chemistry Vol. 15: pp. 6619-6625
Ligand Properties
Formula C9H14N2O9PS
Molecular Weight 357.254
Exact Mass 357.016
No. of atoms 36
No. of bonds 37
Polar Surface Area 226.86
LOGP Value -3.75      (Computed with XLOGP3)
-2.88      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P11172  
Entrez Gene IDNCBI Entrez Gene ID: 7372  
ASDInformation of known allosteric effects of PDB entries
 
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