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Related entries of code: 5hgq
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4pg3RCSB PDB    PDBbindKRS
4ycuRCSB PDB    PDBbindKRS
4ycvRCSB PDB    PDBbindKRS
4ycwRCSB PDB    PDBbindKRS

Entry Information
PDB ID5hgq
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameLoa loa Lysyl-tRNA synthetase (LlKRS)
Ligand NameKRS
EC.Number E.C.6.1.1.6
Resolution 3.28(Å)
Affinity (Kd/Ki/IC50)Kd=45.2nM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Plos Negl Trop Dis Vol. : pp. 1-19
Ligand Properties
Formula C16H20O5
Molecular Weight 292.327
Exact Mass 292.131
No. of atoms 41
No. of bonds 43
Polar Surface Area 75.99
LOGP Value 3.27      (Computed with XLOGP3)
2.53      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACNo matched UniProt accession number (AC) found!
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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