Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 5o3q
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5o3rRCSB PDB    PDBbind120aa, >5O3R_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2k0gRCSB PDB    PDBbindCMP
2oz6RCSB PDB    PDBbindCMP
3clpRCSB PDB    PDBbindCMP
3ocpRCSB PDB    PDBbindCMP
3otfRCSB PDB    PDBbindCMP
3u10RCSB PDB    PDBbindCMP
4clpRCSB PDB    PDBbindCMP
4hbnRCSB PDB    PDBbindCMP
5ahwRCSB PDB    PDBbindCMP
5btxRCSB PDB    PDBbindCMP
5k8sRCSB PDB    PDBbindCMP
5kbfRCSB PDB    PDBbindCMP
5w10RCSB PDB    PDBbindCMP
6hq4RCSB PDB    PDBbindCMP
6hq3RCSB PDB    PDBbindCMP
Entry Information
PDB ID5o3q
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameMembrane-associated protein slr1513
Ligand NameCMP
EC.Number E.C.-.-.-.-
Resolution 1.75(Å)
Affinity (Kd/Ki/IC50)Kd=2.1uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Proc. Natl. Acad. Sci. U.S.A. Vol. 115: pp. E4861-E4869
Ligand Properties
Formula C10H13N5O6P
Molecular Weight 330.214
Exact Mass 330.060
No. of atoms 35
No. of bonds 38
Polar Surface Area 171.59
LOGP Value -2.64      (Computed with XLOGP3)
-0.67      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P73954  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com