Browse entries in the PDBbind-CN Database

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Related entries of code: 5t4u
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4uyeRCSB PDB    PDBbind118aa, >4UYE_1|Chains... *
5c7nRCSB PDB    PDBbind116aa, >5C7N_1|Chain... at 97%
5c85RCSB PDB    PDBbind116aa, >5C85_1|Chain... at 97%
5c87RCSB PDB    PDBbind116aa, >5C87_1|Chain... at 97%
5d7xRCSB PDB    PDBbind116aa, >5D7X_1|Chain... at 97%
5dy7RCSB PDB    PDBbind116aa, >5DY7_1|Chain... at 97%
5dyaRCSB PDB    PDBbind116aa, >5DYA_1|Chain... at 97%
5e3dRCSB PDB    PDBbind116aa, >5E3D_1|Chain... at 97%
5e3gRCSB PDB    PDBbind116aa, >5E3G_1|Chain... at 97%
5em3RCSB PDB    PDBbind116aa, >5EM3_1|Chain... at 97%
5eprRCSB PDB    PDBbind116aa, >5EPR_1|Chain... at 97%
5epsRCSB PDB    PDBbind116aa, >5EPS_1|Chain... at 97%
5eq1RCSB PDB    PDBbind116aa, >5EQ1_1|Chain... at 97%
5etbRCSB PDB    PDBbind116aa, >5ETB_1|Chain... at 97%
5evaRCSB PDB    PDBbind116aa, >5EVA_1|Chain... at 97%
5ewdRCSB PDB    PDBbind116aa, >5EWD_1|Chain... at 97%
5ewhRCSB PDB    PDBbind116aa, >5EWH_1|Chain... at 97%
5mwgRCSB PDB    PDBbind116aa, >5MWG_1|Chains... at 97%
5mwhRCSB PDB    PDBbind116aa, >5MWH_1|Chains... at 97%
5mwzRCSB PDB    PDBbind116aa, >5MWZ_1|Chain... at 97%
5mygRCSB PDB    PDBbind116aa, >5MYG_1|Chains... at 97%
5o4sRCSB PDB    PDBbind116aa, >5O4S_1|Chains... at 97%
5o4tRCSB PDB    PDBbind116aa, >5O4T_1|Chain... at 97%
5o55RCSB PDB    PDBbind116aa, >5O55_1|Chain... at 97%
5o5aRCSB PDB    PDBbind116aa, >5O5A_1|Chain... at 97%
5o5fRCSB PDB    PDBbind116aa, >5O5F_1|Chain... at 97%
5o5hRCSB PDB    PDBbind116aa, >5O5H_1|Chain... at 97%
5ov8RCSB PDB    PDBbind116aa, >5OV8_1|Chains... at 97%
5owaRCSB PDB    PDBbind116aa, >5OWA_1|Chains... at 97%
5t4vRCSB PDB    PDBbind116aa, >5T4V_1|Chain... at 97%
6ekqRCSB PDB    PDBbind116aa, >6EKQ_1|Chains... at 97%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID5t4u
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameBromodomain and PHD Finger-Containing Proteins I
Ligand Name12Q
EC.Number E.C.-.-.-.-
Resolution 1.5(Å)
Affinity (Kd/Ki/IC50)IC50=4800nM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) J. Med. Chem. Vol. 60: pp. 668-680
Ligand Properties
Formula C10H9NO
Molecular Weight 159.185
Exact Mass 159.068
No. of atoms 21
No. of bonds 22
Polar Surface Area 22
LOGP Value 1.52      (Computed with XLOGP3)
1.54      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 2
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P55201  
Entrez Gene IDNCBI Entrez Gene ID: 7862  
ASDInformation of known allosteric effects of PDB entries
 
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