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Related entries of code: 5v83
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5v86RCSB PDB    PDBbind384aa, >5V86_1|Chain... at 99%
5v88RCSB PDB    PDBbind384aa, >5V88_1|Chain... at 99%
6bg3RCSB PDB    PDBbind384aa, >6BG3_1|Chain... at 100%
6bg5RCSB PDB    PDBbind384aa, >6BG5_1|Chain... at 100%
6p5wRCSB PDB    PDBbind384aa, >6P5W_1|Chain... at 100%
6p5vRCSB PDB    PDBbind384aa, >6P5V_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID5v83
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameLysozyme,DCN1-like protein 1 chimera
Ligand Name8Z7
EC.Number E.C.-.-.-.-
Resolution 2(Å)
Affinity (Kd/Ki/IC50)IC50=6.91uM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2017) Nat. Chem. Biol. Vol. 13: pp. 850-857
Ligand Properties
Formula C20H23F3N3O
Molecular Weight 378.411
Exact Mass 378.179
No. of atoms 50
No. of bonds 52
Polar Surface Area 45.57
LOGP Value 3.90      (Computed with XLOGP3)
5.11      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q96GG9  P00720  
Entrez Gene IDNCBI Entrez Gene ID: 54165  1258585  
ASDInformation of known allosteric effects of PDB entries

 
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