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Related entries of code: 6exs
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6hzpRCSB PDB    PDBbind487aa, >6HZP_1|Chain... at 100%
6h7uRCSB PDB    PDBbind487aa, >6H7U_1|Chain... at 100%
6gz9RCSB PDB    PDBbind488aa, >6GZ9_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6exs
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NamePeptide transporter permease
Ligand NameC3H
EC.Number E.C.-.-.-.-
Resolution 2.5(Å)
Affinity (Kd/Ki/IC50)Ki=362uM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2018) Elife Vol. 7: pp. 1-26
Ligand Properties
Formula C12H25N2O4S
Molecular Weight 293.403
Exact Mass 293.154
No. of atoms 44
No. of bonds 43
Polar Surface Area 139.57
LOGP Value -1.31      (Computed with XLOGP3)
-0.14      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 11
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A0A657M1C3  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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