Browse entries in the PDBbind-CN Database

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Related entries of code: 6gz9
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6exsRCSB PDB    PDBbind487aa, >6EXS_1|Chain... at 99%
6hzpRCSB PDB    PDBbind487aa, >6HZP_1|Chain... at 100%
6h7uRCSB PDB    PDBbind487aa, >6H7U_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6hzpRCSB PDB    PDBbindTXC
Entry Information
PDB ID6gz9
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePeptide ABC transporter permease
Ligand NameTXC
EC.Number E.C.-.-.-.-
Resolution 3.1(Å)
Affinity (Kd/Ki/IC50)IC50=7.4mM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Proc. Natl. Acad. Sci. U.S.A. Vol. 116: pp. 804-809
Ligand Properties
Formula C13H22N6O4
Molecular Weight 326.352
Exact Mass 326.170
No. of atoms 45
No. of bonds 46
Polar Surface Area 154.01
LOGP Value 0.39      (Computed with XLOGP3)
-1.51      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 10
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A0A657M1C3  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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