Browse entries in the PDBbind-CN Database

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Related entries of code: 6h7u
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6exsRCSB PDB    PDBbind487aa, >6EXS_1|Chain... at 99%
6hzpRCSB PDB    PDBbind487aa, >6HZP_1|Chain... at 100%
6gz9RCSB PDB    PDBbind488aa, >6GZ9_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID6h7u
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePeptide ABC transporter permease
Ligand NameFVT
EC.Number E.C.-.-.-.-
Resolution 2.8(Å)
Affinity (Kd/Ki/IC50)IC50=10.4mM
Release Year2018
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Proc. Natl. Acad. Sci. U.S.A. Vol. 116: pp. 804-809
Ligand Properties
Formula C5H10NO3
Molecular Weight 132.138
Exact Mass 132.066
No. of atoms 19
No. of bonds 18
Polar Surface Area 82.01
LOGP Value -2.37      (Computed with XLOGP3)
-1.34      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A0A657M1C3  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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