Browse entries in the PDBbind-CN Database

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Related entries of code: 6k1s
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4x60RCSB PDB    PDBbind350aa, >4X60_2|Chain... *
4x61RCSB PDB    PDBbind350aa, >4X61_2|Chain... at 100%
4x63RCSB PDB    PDBbind350aa, >4X63_2|Chain... at 100%
5emjRCSB PDB    PDBbind350aa, >5EMJ_2|Chain... at 100%
5emkRCSB PDB    PDBbind350aa, >5EMK_2|Chain... at 100%
5emlRCSB PDB    PDBbind350aa, >5EML_2|Chain... at 100%
5emmRCSB PDB    PDBbind350aa, >5EMM_2|Chain... at 100%
6ckcRCSB PDB    PDBbind344aa, >6CKC_2|Chain... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID6k1s
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePRMT5
Ligand NameCUX
EC.Number E.C.-.-.-.-
Resolution 2.6(Å)
Affinity (Kd/Ki/IC50)IC50=0.020uM
Release Year2019
Protein/NA SequenceCheck fasta file
Primary Reference (2019) Acs Med.Chem.Lett. Vol. 10: pp. 1033-1038
Ligand Properties
Formula C19H19ClN4O4
Molecular Weight 402.832
Exact Mass 402.109
No. of atoms 47
No. of bonds 50
Polar Surface Area 112.99
LOGP Value 1.14      (Computed with XLOGP3)
2.16      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): O14744  Q9BQA1  
Entrez Gene IDNCBI Entrez Gene ID: 10419  79084  
ASDInformation of known allosteric effects of PDB entries

 
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