Browse entries in the PDBbind-CN Database

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Related entries of code: 2axi
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1rv1RCSB PDB    PDBbind85aa, >1RV1_1|Chains... at 98%
1t4eRCSB PDB    PDBbind96aa, >1T4E_1|Chains... at 98%
2gv2RCSB PDB    PDBbind110aa, >2GV2_1|Chain... at 99%
2lzgRCSB PDB    PDBbind125aa, >2LZG_1|Chain... at 100%
3jzkRCSB PDB    PDBbind96aa, >3JZK_1|Chain... at 98%
3lbkRCSB PDB    PDBbind95aa, >3LBK_1|Chain... at 97%
3lblRCSB PDB    PDBbind95aa, >3LBL_1|Chains... at 98%
3lnzRCSB PDB    PDBbind85aa, >3LNZ_1|Chains... at 100%
3tu1RCSB PDB    PDBbind108aa, >3TU1_1|Chain... at 100%
3vbgRCSB PDB    PDBbind85aa, >3VBG_1|Chains... at 98%
3vzvRCSB PDB    PDBbind87aa, >3VZV_1|Chains... at 96%
3w69RCSB PDB    PDBbind87aa, >3W69_1|Chains... at 96%
4dijRCSB PDB    PDBbind96aa, >4DIJ_1|Chains... at 97%
4ereRCSB PDB    PDBbind96aa, >4ERE_1|Chains... at 98%
4erfRCSB PDB    PDBbind96aa, >4ERF_1|Chains... at 98%
4hbmRCSB PDB    PDBbind120aa, >4HBM_1|Chains... at 100%
4hg7RCSB PDB    PDBbind97aa, >4HG7_1|Chain... at 93%
4jv7RCSB PDB    PDBbind96aa, >4JV7_1|Chain... at 97%
4jv9RCSB PDB    PDBbind96aa, >4JV9_1|Chain... at 97%
4jveRCSB PDB    PDBbind96aa, >4JVE_1|Chain... at 97%
4jwrRCSB PDB    PDBbind95aa, >4JWR_1|Chains... at 100%
4mdnRCSB PDB    PDBbind94aa, >4MDN_1|Chain... at 98%
4mdqRCSB PDB    PDBbind86aa, >4MDQ_1|Chain... at 100%
4oasRCSB PDB    PDBbind96aa, >4OAS_1|Chains... at 98%
4obaRCSB PDB    PDBbind96aa, >4OBA_1|Chains... at 98%
4occRCSB PDB    PDBbind96aa, >4OCC_1|Chains... at 98%
4odeRCSB PDB    PDBbind105aa, >4ODE_1|Chain... at 100%
4odfRCSB PDB    PDBbind105aa, >4ODF_1|Chain... at 100%
4ognRCSB PDB    PDBbind105aa, >4OGN_1|Chain... at 100%
4ogtRCSB PDB    PDBbind105aa, >4OGT_1|Chain... at 100%
4ogvRCSB PDB    PDBbind95aa, >4OGV_1|Chains... at 100%
4oq3RCSB PDB    PDBbind96aa, >4OQ3_1|Chains... at 97%
4qo4RCSB PDB    PDBbind96aa, >4QO4_1|Chain... at 98%
4qocRCSB PDB    PDBbind96aa, >4QOC_1|Chains... at 98%
4wt2RCSB PDB    PDBbind105aa, >4WT2_1|Chain... at 100%
4zfiRCSB PDB    PDBbind97aa, >4ZFI_1|Chains... at 98%
4zgkRCSB PDB    PDBbind98aa, >4ZGK_1|Chains... at 98%
4zycRCSB PDB    PDBbind96aa, >4ZYC_1|Chains... at 97%
4zyfRCSB PDB    PDBbind96aa, >4ZYF_1|Chain... at 98%
4zyiRCSB PDB    PDBbind96aa, >4ZYI_1|Chain... at 98%
5hmhRCSB PDB    PDBbind101aa, >5HMH_1|Chains... at 93%
5hmiRCSB PDB    PDBbind104aa, >5HMI_1|Chains... at 93%
5hmkRCSB PDB    PDBbind109aa, >5HMK_1|Chains... at 98%
5j7fRCSB PDB    PDBbind125aa, >5J7F_1|Chains... at 100%
5j7gRCSB PDB    PDBbind109aa, >5J7G_1|Chains... at 99%
5lavRCSB PDB    PDBbind93aa, >5LAV_1|Chain... at 100%
5lawRCSB PDB    PDBbind94aa, >5LAW_1|Chain... at 100%
5layRCSB PDB    PDBbind95aa, >5LAY_1|Chains... at 100%
5lazRCSB PDB    PDBbind94aa, >5LAZ_1|Chain... at 100%
5trfRCSB PDB    PDBbind109aa, >5TRF_1|Chains... at 100%
6ggnRCSB PDB    PDBbind96aa, >6GGN_1|Chain... at 98%
6i3sRCSB PDB    PDBbind94aa, >6I3S_1|Chain... at 100%
6q9oRCSB PDB    PDBbind96aa, >6Q9O_1|Chains... at 98%
6q9lRCSB PDB    PDBbind96aa, >6Q9L_1|Chains... at 98%
6q9hRCSB PDB    PDBbind96aa, >6Q9H_1|Chain... at 98%
6q96RCSB PDB    PDBbind96aa, >6Q96_1|Chains... at 98%
6im9RCSB PDB    PDBbind122aa, >6IM9_2|Chain... at 98%
5oaiRCSB PDB    PDBbind97aa, >5OAI_1|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1aqcRCSB PDB    PDBbind10-mer
1awiRCSB PDB    PDBbind10-mer
1azeRCSB PDB    PDBbind10-mer
1bjrRCSB PDB    PDBbind10-mer
1ckaRCSB PDB    PDBbind10-mer
1ckbRCSB PDB    PDBbind10-mer
1eb1RCSB PDB    PDBbind10-mer
1gbqRCSB PDB    PDBbind10-mer
1gvuRCSB PDB    PDBbind10-mer
1himRCSB PDB    PDBbind10-mer
1jd5RCSB PDB    PDBbind10-mer
1jd6RCSB PDB    PDBbind10-mer
1jmqRCSB PDB    PDBbind10-mer
1pywRCSB PDB    PDBbind10-mer
1vj6RCSB PDB    PDBbind10-mer
1vr1RCSB PDB    PDBbind10-mer
1y2aRCSB PDB    PDBbind10-mer
1ywiRCSB PDB    PDBbind10-mer
1yy6RCSB PDB    PDBbind10-mer
1zkkRCSB PDB    PDBbind10-mer
2a0tRCSB PDB    PDBbind10-mer
2aohRCSB PDB    PDBbind10-mer
2aojRCSB PDB    PDBbind10-mer
2azmRCSB PDB    PDBbind10-mer
2b7fRCSB PDB    PDBbind10-mer
2c2lRCSB PDB    PDBbind10-mer
2gfaRCSB PDB    PDBbind10-mer
2h13RCSB PDB    PDBbind10-mer
2hrpRCSB PDB    PDBbind10-mer
2ig0RCSB PDB    PDBbind10-mer
2jmjRCSB PDB    PDBbind10-mer
2jqiRCSB PDB    PDBbind10-mer
2jqlRCSB PDB    PDBbind10-mer
2k2rRCSB PDB    PDBbind10-mer
2ke1RCSB PDB    PDBbind10-mer
2mnzRCSB PDB    PDBbind10-mer
2nxdRCSB PDB    PDBbind10-mer
2nxlRCSB PDB    PDBbind10-mer
2nxmRCSB PDB    PDBbind10-mer
2o9vRCSB PDB    PDBbind10-mer
2pehRCSB PDB    PDBbind10-mer
2pr9RCSB PDB    PDBbind10-mer
2puyRCSB PDB    PDBbind10-mer
2qqsRCSB PDB    PDBbind10-mer
2r3yRCSB PDB    PDBbind10-mer
2r7gRCSB PDB    PDBbind10-mer
2rr4RCSB PDB    PDBbind10-mer
2v7dRCSB PDB    PDBbind10-mer
2vnfRCSB PDB    PDBbind10-mer
2w6tRCSB PDB    PDBbind10-mer
2w77RCSB PDB    PDBbind10-mer
2wa8RCSB PDB    PDBbind10-mer
2wp1RCSB PDB    PDBbind10-mer
2z5oRCSB PDB    PDBbind10-mer
3al3RCSB PDB    PDBbind10-mer
3bh8RCSB PDB    PDBbind10-mer
3bh9RCSB PDB    PDBbind10-mer
3bhbRCSB PDB    PDBbind10-mer
3c94RCSB PDB    PDBbind10-mer
3d1eRCSB PDB    PDBbind10-mer
3diwRCSB PDB    PDBbind10-mer
3dnjRCSB PDB    PDBbind10-mer
3dpcRCSB PDB    PDBbind10-mer
3dvpRCSB PDB    PDBbind10-mer
3ebbRCSB PDB    PDBbind10-mer
3er5RCSB PDB    PDBbind10-mer
3f9wRCSB PDB    PDBbind10-mer
3f9yRCSB PDB    PDBbind10-mer
3fe7RCSB PDB    PDBbind10-mer
3feaRCSB PDB    PDBbind10-mer
3gbqRCSB PDB    PDBbind10-mer
3gdsRCSB PDB    PDBbind10-mer
3hg1RCSB PDB    PDBbind10-mer
3iqjRCSB PDB    PDBbind10-mer
3ivvRCSB PDB    PDBbind10-mer
3nkxRCSB PDB    PDBbind10-mer
3oq5RCSB PDB    PDBbind10-mer
3pujRCSB PDB    PDBbind10-mer
3pukRCSB PDB    PDBbind10-mer
3pxeRCSB PDB    PDBbind10-mer
3q8dRCSB PDB    PDBbind10-mer
3qztRCSB PDB    PDBbind10-mer
3rwiRCSB PDB    PDBbind10-mer
3shvRCSB PDB    PDBbind10-mer
3szmRCSB PDB    PDBbind10-mer
3tkzRCSB PDB    PDBbind10-mer
3tl0RCSB PDB    PDBbind10-mer
3uiiRCSB PDB    PDBbind10-mer
3uikRCSB PDB    PDBbind10-mer
3uvmRCSB PDB    PDBbind10-mer
3zmpRCSB PDB    PDBbind10-mer
3zmqRCSB PDB    PDBbind10-mer
4bg6RCSB PDB    PDBbind10-mer
4e34RCSB PDB    PDBbind10-mer
4e35RCSB PDB    PDBbind10-mer
4e3bRCSB PDB    PDBbind10-mer
4e81RCSB PDB    PDBbind10-mer
4e9dRCSB PDB    PDBbind10-mer
4er4RCSB PDB    PDBbind10-mer
4h39RCSB PDB    PDBbind10-mer
4h3bRCSB PDB    PDBbind10-mer
4hczRCSB PDB    PDBbind10-mer
4i2wRCSB PDB    PDBbind10-mer
4i2zRCSB PDB    PDBbind10-mer
4jfdRCSB PDB    PDBbind10-mer
4jfeRCSB PDB    PDBbind10-mer
4jffRCSB PDB    PDBbind10-mer
4jjqRCSB PDB    PDBbind10-mer
4joeRCSB PDB    PDBbind10-mer
4jofRCSB PDB    PDBbind10-mer
4jogRCSB PDB    PDBbind10-mer
4johRCSB PDB    PDBbind10-mer
4jojRCSB PDB    PDBbind10-mer
4jokRCSB PDB    PDBbind10-mer
4k6yRCSB PDB    PDBbind10-mer
4k72RCSB PDB    PDBbind10-mer
4k75RCSB PDB    PDBbind10-mer
4k76RCSB PDB    PDBbind10-mer
4k78RCSB PDB    PDBbind10-mer
4lnpRCSB PDB    PDBbind10-mer
4mdrRCSB PDB    PDBbind10-mer
4n84RCSB PDB    PDBbind10-mer
4nmoRCSB PDB    PDBbind10-mer
4nmpRCSB PDB    PDBbind10-mer
4nmqRCSB PDB    PDBbind10-mer
4nmrRCSB PDB    PDBbind10-mer
4nmsRCSB PDB    PDBbind10-mer
4nmtRCSB PDB    PDBbind10-mer
4nmvRCSB PDB    PDBbind10-mer
4o2cRCSB PDB    PDBbind10-mer
4oz1RCSB PDB    PDBbind10-mer
4p0aRCSB PDB    PDBbind10-mer
4p0bRCSB PDB    PDBbind10-mer
4qokRCSB PDB    PDBbind10-mer
4rqzRCSB PDB    PDBbind10-mer
4u90RCSB PDB    PDBbind10-mer
4v11RCSB PDB    PDBbind10-mer
4wj5RCSB PDB    PDBbind10-mer
4x1nRCSB PDB    PDBbind10-mer
4x1pRCSB PDB    PDBbind10-mer
4x1qRCSB PDB    PDBbind10-mer
4x1rRCSB PDB    PDBbind10-mer
4x1sRCSB PDB    PDBbind10-mer
4x34RCSB PDB    PDBbind10-mer
4x3sRCSB PDB    PDBbind10-mer
4x8nRCSB PDB    PDBbind10-mer
4xhvRCSB PDB    PDBbind10-mer
4z0uRCSB PDB    PDBbind10-mer
4z7iRCSB PDB    PDBbind10-mer
4zhlRCSB PDB    PDBbind10-mer
4zhmRCSB PDB    PDBbind10-mer
5ab0RCSB PDB    PDBbind10-mer
5aeiRCSB PDB    PDBbind10-mer
5azgRCSB PDB    PDBbind10-mer
5c0mRCSB PDB    PDBbind10-mer
5c11RCSB PDB    PDBbind10-mer
5c13RCSB PDB    PDBbind10-mer
5d6yRCSB PDB    PDBbind10-mer
5gp7RCSB PDB    PDBbind10-mer
5gs4RCSB PDB    PDBbind10-mer
5gtrRCSB PDB    PDBbind10-mer
5iawRCSB PDB    PDBbind10-mer
5j31RCSB PDB    PDBbind10-mer
5jziRCSB PDB    PDBbind10-mer
5myoRCSB PDB    PDBbind10-mer
5n1yRCSB PDB    PDBbind10-mer
5nx2RCSB PDB    PDBbind10-mer
5t6zRCSB PDB    PDBbind10-mer
5t70RCSB PDB    PDBbind10-mer
5t8rRCSB PDB    PDBbind10-mer
5vnbRCSB PDB    PDBbind10-mer
5w7iRCSB PDB    PDBbind10-mer
5w7jRCSB PDB    PDBbind10-mer
5wkfRCSB PDB    PDBbind10-mer
5wkhRCSB PDB    PDBbind10-mer
6ar2RCSB PDB    PDBbind10-mer
6buuRCSB PDB    PDBbind10-mer
6fkpRCSB PDB    PDBbind10-mer
6mimRCSB PDB    PDBbind10-mer
6qtxRCSB PDB    PDBbind10-mer
6pekRCSB PDB    PDBbind10-mer
6iiwRCSB PDB    PDBbind10-mer
6hzxRCSB PDB    PDBbind10-mer
6hoiRCSB PDB    PDBbind10-mer
6dkpRCSB PDB    PDBbind10-mer
6a8nRCSB PDB    PDBbind10-mer
5zysRCSB PDB    PDBbind10-mer
Entry Information
PDB ID2axi
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameubiquitin-protein ligase e3 mdm2
Ligand Name10-mer
EC.Number E.C.6.3.2.0
Resolution 1.4(Å)
Affinity (Kd/Ki/IC50)IC50=0.14uM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference Chembiochem v7 pp. 515-26, 2006
Ligand Properties
Formula C7H18NO4S
Molecular Weight 212.287
Exact Mass 212.096
No. of atoms 31
No. of bonds 31
Polar Surface Area 99.66
LOGP Value -3.07      (Computed with XLOGP3)
1.08      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q00987  
Entrez Gene IDNCBI Entrez Gene ID: 4193  
ASDInformation of known allosteric effects of PDB entries
 
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