Browse entries in the PDBbind-CN Database

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Related entries of code: 4x1p
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1ejnRCSB PDB    PDBbind253aa, >1EJN_1|Chain... at 99%
1f5kRCSB PDB    PDBbind253aa, >1F5K_1|Chain... at 99%
1f5lRCSB PDB    PDBbind253aa, >1F5L_1|Chain... at 99%
1f92RCSB PDB    PDBbind253aa, >1F92_1|Chain... at 99%
1fv9RCSB PDB    PDBbind245aa, >1FV9_1|Chain... at 99%
1owdRCSB PDB    PDBbind245aa, >1OWD_1|Chain... at 99%
1oweRCSB PDB    PDBbind245aa, >1OWE_1|Chain... at 99%
1owhRCSB PDB    PDBbind245aa, >1OWH_1|Chain... at 99%
1owiRCSB PDB    PDBbind245aa, >1OWI_1|Chain... at 99%
1owjRCSB PDB    PDBbind245aa, >1OWJ_1|Chain... at 99%
1owkRCSB PDB    PDBbind245aa, >1OWK_1|Chain... at 99%
1sc8RCSB PDB    PDBbind262aa, >1SC8_1|Chain... at 99%
1sqaRCSB PDB    PDBbind245aa, >1SQA_1|Chain... at 99%
1sqoRCSB PDB    PDBbind245aa, >1SQO_1|Chain... at 99%
1sqtRCSB PDB    PDBbind245aa, >1SQT_1|Chain... at 99%
1u6qRCSB PDB    PDBbind245aa, >1U6Q_1|Chain... at 99%
1vj9RCSB PDB    PDBbind262aa, >1VJ9_1|Chain... at 99%
1vjaRCSB PDB    PDBbind262aa, >1VJA_1|Chain... at 99%
1w0zRCSB PDB    PDBbind247aa, >1W0Z_1|Chain... at 99%
1w10RCSB PDB    PDBbind247aa, >1W10_1|Chain... at 99%
1w11RCSB PDB    PDBbind247aa, >1W11_1|Chain... at 99%
1w12RCSB PDB    PDBbind247aa, >1W12_1|Chain... at 99%
1w13RCSB PDB    PDBbind247aa, >1W13_1|Chain... at 99%
1w14RCSB PDB    PDBbind247aa, >1W14_1|Chain... at 99%
2r2wRCSB PDB    PDBbind253aa, >2R2W_1|Chain... at 99%
2vinRCSB PDB    PDBbind253aa, >2VIN_1|Chain... at 99%
2vioRCSB PDB    PDBbind253aa, >2VIO_1|Chain... at 99%
2vipRCSB PDB    PDBbind253aa, >2VIP_1|Chain... at 99%
2viqRCSB PDB    PDBbind253aa, >2VIQ_1|Chain... at 99%
2vivRCSB PDB    PDBbind253aa, >2VIV_1|Chain... at 99%
2viwRCSB PDB    PDBbind253aa, >2VIW_1|Chain... at 99%
2vntRCSB PDB    PDBbind276aa, >2VNT_1|Chains... at 96%
3kgpRCSB PDB    PDBbind253aa, >3KGP_1|Chain... at 99%
3khvRCSB PDB    PDBbind253aa, >3KHV_1|Chain... at 99%
3kidRCSB PDB    PDBbind253aa, >3KID_1|Chain... at 99%
3mhwRCSB PDB    PDBbind247aa, >3MHW_1|Chain... at 99%
4h42RCSB PDB    PDBbind248aa, >4H42_1|Chain... at 99%
4mnvRCSB PDB    PDBbind245aa, >4MNV_1|Chain... at 99%
4x1nRCSB PDB    PDBbind247aa, >4X1N_2|Chain... at 98%
4x1qRCSB PDB    PDBbind247aa, >4X1Q_2|Chain... at 98%
4x1rRCSB PDB    PDBbind247aa, >4X1R_2|Chain... at 98%
4x1sRCSB PDB    PDBbind247aa, >4X1S_2|Chain... at 98%
4zhlRCSB PDB    PDBbind247aa, >4ZHL_1|Chain... at 98%
4zhmRCSB PDB    PDBbind247aa, >4ZHM_2|Chain... at 98%
5wxpRCSB PDB    PDBbind253aa, >5WXP_1|Chain... at 99%
5xg4RCSB PDB    PDBbind246aa, >5XG4_1|Chain... at 99%
5z1cRCSB PDB    PDBbind245aa, >5Z1C_1|Chain... at 99%
5za7RCSB PDB    PDBbind253aa, >5ZA7_1|Chain... at 99%
5za8RCSB PDB    PDBbind253aa, >5ZA8_1|Chain... at 99%
5za9RCSB PDB    PDBbind253aa, >5ZA9_1|Chain... at 99%
5zaeRCSB PDB    PDBbind253aa, >5ZAE_1|Chain... at 99%
5zafRCSB PDB    PDBbind253aa, >5ZAF_1|Chain... at 99%
5zagRCSB PDB    PDBbind253aa, >5ZAG_1|Chain... at 99%
5zahRCSB PDB    PDBbind253aa, >5ZAH_1|Chain... at 99%
5zajRCSB PDB    PDBbind253aa, >5ZAJ_1|Chain... at 99%
5zc5RCSB PDB    PDBbind253aa, >5ZC5_1|Chain... at 99%
6nmbRCSB PDB    PDBbind281aa, >6NMB_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1aqcRCSB PDB    PDBbind10-mer
1awiRCSB PDB    PDBbind10-mer
1azeRCSB PDB    PDBbind10-mer
1bjrRCSB PDB    PDBbind10-mer
1ckaRCSB PDB    PDBbind10-mer
1ckbRCSB PDB    PDBbind10-mer
1eb1RCSB PDB    PDBbind10-mer
1gbqRCSB PDB    PDBbind10-mer
1gvuRCSB PDB    PDBbind10-mer
1himRCSB PDB    PDBbind10-mer
1jd5RCSB PDB    PDBbind10-mer
1jd6RCSB PDB    PDBbind10-mer
1jmqRCSB PDB    PDBbind10-mer
1pywRCSB PDB    PDBbind10-mer
1vj6RCSB PDB    PDBbind10-mer
1vr1RCSB PDB    PDBbind10-mer
1y2aRCSB PDB    PDBbind10-mer
1ywiRCSB PDB    PDBbind10-mer
1yy6RCSB PDB    PDBbind10-mer
1zkkRCSB PDB    PDBbind10-mer
2a0tRCSB PDB    PDBbind10-mer
2aohRCSB PDB    PDBbind10-mer
2aojRCSB PDB    PDBbind10-mer
2axiRCSB PDB    PDBbind10-mer
2azmRCSB PDB    PDBbind10-mer
2b7fRCSB PDB    PDBbind10-mer
2c2lRCSB PDB    PDBbind10-mer
2gfaRCSB PDB    PDBbind10-mer
2h13RCSB PDB    PDBbind10-mer
2hrpRCSB PDB    PDBbind10-mer
2ig0RCSB PDB    PDBbind10-mer
2jmjRCSB PDB    PDBbind10-mer
2jqiRCSB PDB    PDBbind10-mer
2jqlRCSB PDB    PDBbind10-mer
2k2rRCSB PDB    PDBbind10-mer
2ke1RCSB PDB    PDBbind10-mer
2mnzRCSB PDB    PDBbind10-mer
2nxdRCSB PDB    PDBbind10-mer
2nxlRCSB PDB    PDBbind10-mer
2nxmRCSB PDB    PDBbind10-mer
2o9vRCSB PDB    PDBbind10-mer
2pehRCSB PDB    PDBbind10-mer
2pr9RCSB PDB    PDBbind10-mer
2puyRCSB PDB    PDBbind10-mer
2qqsRCSB PDB    PDBbind10-mer
2r3yRCSB PDB    PDBbind10-mer
2r7gRCSB PDB    PDBbind10-mer
2rr4RCSB PDB    PDBbind10-mer
2v7dRCSB PDB    PDBbind10-mer
2vnfRCSB PDB    PDBbind10-mer
2w6tRCSB PDB    PDBbind10-mer
2w77RCSB PDB    PDBbind10-mer
2wa8RCSB PDB    PDBbind10-mer
2wp1RCSB PDB    PDBbind10-mer
2z5oRCSB PDB    PDBbind10-mer
3al3RCSB PDB    PDBbind10-mer
3bh8RCSB PDB    PDBbind10-mer
3bh9RCSB PDB    PDBbind10-mer
3bhbRCSB PDB    PDBbind10-mer
3c94RCSB PDB    PDBbind10-mer
3d1eRCSB PDB    PDBbind10-mer
3diwRCSB PDB    PDBbind10-mer
3dnjRCSB PDB    PDBbind10-mer
3dpcRCSB PDB    PDBbind10-mer
3dvpRCSB PDB    PDBbind10-mer
3ebbRCSB PDB    PDBbind10-mer
3er5RCSB PDB    PDBbind10-mer
3f9wRCSB PDB    PDBbind10-mer
3f9yRCSB PDB    PDBbind10-mer
3fe7RCSB PDB    PDBbind10-mer
3feaRCSB PDB    PDBbind10-mer
3gbqRCSB PDB    PDBbind10-mer
3gdsRCSB PDB    PDBbind10-mer
3hg1RCSB PDB    PDBbind10-mer
3iqjRCSB PDB    PDBbind10-mer
3ivvRCSB PDB    PDBbind10-mer
3nkxRCSB PDB    PDBbind10-mer
3oq5RCSB PDB    PDBbind10-mer
3pujRCSB PDB    PDBbind10-mer
3pukRCSB PDB    PDBbind10-mer
3pxeRCSB PDB    PDBbind10-mer
3q8dRCSB PDB    PDBbind10-mer
3qztRCSB PDB    PDBbind10-mer
3rwiRCSB PDB    PDBbind10-mer
3shvRCSB PDB    PDBbind10-mer
3szmRCSB PDB    PDBbind10-mer
3tkzRCSB PDB    PDBbind10-mer
3tl0RCSB PDB    PDBbind10-mer
3uiiRCSB PDB    PDBbind10-mer
3uikRCSB PDB    PDBbind10-mer
3uvmRCSB PDB    PDBbind10-mer
3zmpRCSB PDB    PDBbind10-mer
3zmqRCSB PDB    PDBbind10-mer
4bg6RCSB PDB    PDBbind10-mer
4e34RCSB PDB    PDBbind10-mer
4e35RCSB PDB    PDBbind10-mer
4e3bRCSB PDB    PDBbind10-mer
4e81RCSB PDB    PDBbind10-mer
4e9dRCSB PDB    PDBbind10-mer
4er4RCSB PDB    PDBbind10-mer
4h39RCSB PDB    PDBbind10-mer
4h3bRCSB PDB    PDBbind10-mer
4hczRCSB PDB    PDBbind10-mer
4i2wRCSB PDB    PDBbind10-mer
4i2zRCSB PDB    PDBbind10-mer
4jfdRCSB PDB    PDBbind10-mer
4jfeRCSB PDB    PDBbind10-mer
4jffRCSB PDB    PDBbind10-mer
4jjqRCSB PDB    PDBbind10-mer
4joeRCSB PDB    PDBbind10-mer
4jofRCSB PDB    PDBbind10-mer
4jogRCSB PDB    PDBbind10-mer
4johRCSB PDB    PDBbind10-mer
4jojRCSB PDB    PDBbind10-mer
4jokRCSB PDB    PDBbind10-mer
4k6yRCSB PDB    PDBbind10-mer
4k72RCSB PDB    PDBbind10-mer
4k75RCSB PDB    PDBbind10-mer
4k76RCSB PDB    PDBbind10-mer
4k78RCSB PDB    PDBbind10-mer
4lnpRCSB PDB    PDBbind10-mer
4mdrRCSB PDB    PDBbind10-mer
4n84RCSB PDB    PDBbind10-mer
4nmoRCSB PDB    PDBbind10-mer
4nmpRCSB PDB    PDBbind10-mer
4nmqRCSB PDB    PDBbind10-mer
4nmrRCSB PDB    PDBbind10-mer
4nmsRCSB PDB    PDBbind10-mer
4nmtRCSB PDB    PDBbind10-mer
4nmvRCSB PDB    PDBbind10-mer
4o2cRCSB PDB    PDBbind10-mer
4oz1RCSB PDB    PDBbind10-mer
4p0aRCSB PDB    PDBbind10-mer
4p0bRCSB PDB    PDBbind10-mer
4qokRCSB PDB    PDBbind10-mer
4rqzRCSB PDB    PDBbind10-mer
4u90RCSB PDB    PDBbind10-mer
4v11RCSB PDB    PDBbind10-mer
4wj5RCSB PDB    PDBbind10-mer
4x1nRCSB PDB    PDBbind10-mer
4x1qRCSB PDB    PDBbind10-mer
4x1rRCSB PDB    PDBbind10-mer
4x1sRCSB PDB    PDBbind10-mer
4x34RCSB PDB    PDBbind10-mer
4x3sRCSB PDB    PDBbind10-mer
4x8nRCSB PDB    PDBbind10-mer
4xhvRCSB PDB    PDBbind10-mer
4z0uRCSB PDB    PDBbind10-mer
4z7iRCSB PDB    PDBbind10-mer
4zhlRCSB PDB    PDBbind10-mer
4zhmRCSB PDB    PDBbind10-mer
5ab0RCSB PDB    PDBbind10-mer
5aeiRCSB PDB    PDBbind10-mer
5azgRCSB PDB    PDBbind10-mer
5c0mRCSB PDB    PDBbind10-mer
5c11RCSB PDB    PDBbind10-mer
5c13RCSB PDB    PDBbind10-mer
5d6yRCSB PDB    PDBbind10-mer
5gp7RCSB PDB    PDBbind10-mer
5gs4RCSB PDB    PDBbind10-mer
5gtrRCSB PDB    PDBbind10-mer
5iawRCSB PDB    PDBbind10-mer
5j31RCSB PDB    PDBbind10-mer
5jziRCSB PDB    PDBbind10-mer
5myoRCSB PDB    PDBbind10-mer
5n1yRCSB PDB    PDBbind10-mer
5nx2RCSB PDB    PDBbind10-mer
5t6zRCSB PDB    PDBbind10-mer
5t70RCSB PDB    PDBbind10-mer
5t8rRCSB PDB    PDBbind10-mer
5vnbRCSB PDB    PDBbind10-mer
5w7iRCSB PDB    PDBbind10-mer
5w7jRCSB PDB    PDBbind10-mer
5wkfRCSB PDB    PDBbind10-mer
5wkhRCSB PDB    PDBbind10-mer
6ar2RCSB PDB    PDBbind10-mer
6buuRCSB PDB    PDBbind10-mer
6fkpRCSB PDB    PDBbind10-mer
6mimRCSB PDB    PDBbind10-mer
6qtxRCSB PDB    PDBbind10-mer
6pekRCSB PDB    PDBbind10-mer
6iiwRCSB PDB    PDBbind10-mer
6hzxRCSB PDB    PDBbind10-mer
6hoiRCSB PDB    PDBbind10-mer
6dkpRCSB PDB    PDBbind10-mer
6a8nRCSB PDB    PDBbind10-mer
5zysRCSB PDB    PDBbind10-mer
Entry Information
PDB ID4x1p
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameUrokinase-type plasminogen activator
Ligand Name10-mer
EC.Number E.C.3.4.21.73
Resolution 1.6(Å)
Affinity (Kd/Ki/IC50)Kd=62.8uM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) Int.J.Biochem.Cell Biol. Vol. 62: pp. 88-92
Ligand Properties
Formula C48H70N10O16S2
Molecular Weight 1107.260
Exact Mass 1106.440
No. of atoms 146
No. of bonds 149
Polar Surface Area 474.38
LOGP Value -3.05      (Computed with XLOGP3)
-1.03      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 13
No. of Hydrogen Bond Acceptors: 16
No. of Rotatable Bonds: 12
No. of Nitrogen and Oxygen Atoms: 26
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P00749  
Entrez Gene IDNCBI Entrez Gene ID: 5328  
ASDInformation of known allosteric effects of PDB entries
 
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