Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 2nsx
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2v3dRCSB PDB    PDBbind505aa, >2V3D_1|Chains... *
2v3eRCSB PDB    PDBbind505aa, >2V3E_1|Chains... at 100%
2wcgRCSB PDB    PDBbind505aa, >2WCG_1|Chains... at 100%
2xwdRCSB PDB    PDBbind505aa, >2XWD_1|Chains... at 100%
2xweRCSB PDB    PDBbind505aa, >2XWE_1|Chains... at 100%
3rikRCSB PDB    PDBbind497aa, >3RIK_1|Chains... at 100%
3rilRCSB PDB    PDBbind497aa, >3RIL_1|Chains... at 100%
5lvxRCSB PDB    PDBbind497aa, >5LVX_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1oifRCSB PDB    PDBbindIFM
2g9vRCSB PDB    PDBbindIFM
4iicRCSB PDB    PDBbindIFM
4re4RCSB PDB    PDBbindIFM
Entry Information
PDB ID2nsx
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameHuman lysosome acid-beta-glucosidase
Ligand NameIFM
EC.Number E.C.3.2.1.45
Resolution 2.11(Å)
Affinity (Kd/Ki/IC50)IC50=0.063uM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference (2011) Bioorg. Med. Chem., Vol.19, pp.3558-3568
Ligand Properties
Formula C6H14NO3
Molecular Weight 148.180
Exact Mass 148.097
No. of atoms 24
No. of bonds 24
Polar Surface Area 77.3
LOGP Value -1.54      (Computed with XLOGP3)
-1.54      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P04062  
Entrez Gene IDNCBI Entrez Gene ID: 2629  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com