Browse entries in the PDBbind-CN Database

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Related entries of code: 5fb1
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2b2vRCSB PDB    PDBbind16aa, >2B2V_3|Chain... at 93%
2b2wRCSB PDB    PDBbind20aa, >2B2W_3|Chain... at 95%
2co0RCSB PDB    PDBbind15aa, >2CO0_2|Chains... at 100%
2f6jRCSB PDB    PDBbind15aa, >2F6J_2|Chain... at 100%
2fsaRCSB PDB    PDBbind15aa, >2FSA_2|Chain... at 100%
2fuuRCSB PDB    PDBbind15aa, >2FUU_2|Chain... at 100%
2h2gRCSB PDB    PDBbind11aa, >2H2G_2|Chain... at 100%
2h9mRCSB PDB    PDBbind11aa, >2H9M_2|Chains... at 100%
2h9nRCSB PDB    PDBbind11aa, >2H9N_2|Chains... at 100%
2h9pRCSB PDB    PDBbind11aa, >2H9P_2|Chain... at 100%
2l3rRCSB PDB    PDBbind11aa, >2L3R_2|Chain... at 100%
2lbmRCSB PDB    PDBbind15aa, >2LBM_2|Chain... at 100%
2o9kRCSB PDB    PDBbind11aa, >2O9K_2|Chains... at 100%
2r0yRCSB PDB    PDBbind13aa, >2R0Y_2|Chain... at 100%
2rnwRCSB PDB    PDBbind15aa, >2RNW_2|Chain... at 100%
2rnxRCSB PDB    PDBbind13aa, >2RNX_2|Chain... at 92%
2uxnRCSB PDB    PDBbind21aa, >2UXN_3|Chain... at 95%
2v1dRCSB PDB    PDBbind21aa, >2V1D_3|Chain... at 95%
2ybpRCSB PDB    PDBbind12aa, >2YBP_2|Chains... at 91%
2ybsRCSB PDB    PDBbind12aa, >2YBS_2|Chains... at 91%
3askRCSB PDB    PDBbind13aa, >3ASK_2|Chains... at 100%
3aslRCSB PDB    PDBbind11aa, >3ASL_2|Chain... at 100%
3b95RCSB PDB    PDBbind15aa, >3B95_2|Chain... at 100%
3ij0RCSB PDB    PDBbind11aa, >3IJ0_2|Chain... at 100%
3kv4RCSB PDB    PDBbind24aa, >3KV4_2|Chain... at 95%
3me9RCSB PDB    PDBbind11aa, >3ME9_2|Chains... at 100%
3meaRCSB PDB    PDBbind11aa, >3MEA_2|Chain... at 100%
3metRCSB PDB    PDBbind11aa, >3MET_2|Chains... at 100%
3meuRCSB PDB    PDBbind14aa, >3MEU_2|Chains... at 92%
3ql9RCSB PDB    PDBbind15aa, >3QL9_2|Chain... at 100%
3qlcRCSB PDB    PDBbind15aa, >3QLC_2|Chains... at 100%
3uedRCSB PDB    PDBbind12aa, >3UED_2|Chains... at 100%
3uefRCSB PDB    PDBbind12aa, >3UEF_2|Chains... at 100%
3uigRCSB PDB    PDBbind15aa, >3UIG_2|Chains... at 100%
4a7jRCSB PDB    PDBbind16aa, >4A7J_2|Chain... at 100%
4ft2RCSB PDB    PDBbind15aa, >4FT2_2|Chain... at 100%
4ft4RCSB PDB    PDBbind32aa, >4FT4_2|Chains... at 93%
4gy5RCSB PDB    PDBbind17aa, >4GY5_2|Chains... at 100%
4qq4RCSB PDB    PDBbind16aa, >4QQ4_2|Chains... at 93%
4tmpRCSB PDB    PDBbind11aa, >4TMP_2|Chains... at 100%
4u7tRCSB PDB    PDBbind12aa, >4U7T_3|Chains... at 100%
4w5aRCSB PDB    PDBbind15aa, >4W5A_2|Chains... at 100%
4yhpRCSB PDB    PDBbind16aa, >4YHP_1|Chains... at 100%
4yhzRCSB PDB    PDBbind12aa, >4YHZ_3|Chain... at 100%
5fb0RCSB PDB    PDBbind15aa, >5FB0_2|Chains... at 100%
5ix1RCSB PDB    PDBbind15aa, >5IX1_2|Chains... at 100%
5svxRCSB PDB    PDBbind11aa, >5SVX_2|Chain... at 100%
5svyRCSB PDB    PDBbind11aa, >5SVY_2|Chain... at 100%
5x60RCSB PDB    PDBbind20aa, >5X60_3|Chain... at 90%
5znpRCSB PDB    PDBbind15aa, >5ZNP_2|Chains... at 100%
6bhiRCSB PDB    PDBbind16aa, >6BHI_2|Chain... at 100%
6milRCSB PDB    PDBbind19aa, >6MIL_2|Chains... at 94%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1a37RCSB PDB    PDBbind15-mer
1eolRCSB PDB    PDBbind15-mer
1j7zRCSB PDB    PDBbind15-mer
1j80RCSB PDB    PDBbind15-mer
1j81RCSB PDB    PDBbind15-mer
1jycRCSB PDB    PDBbind15-mer
1kc5RCSB PDB    PDBbind15-mer
1kcsRCSB PDB    PDBbind15-mer
1klgRCSB PDB    PDBbind15-mer
1kluRCSB PDB    PDBbind15-mer
1knaRCSB PDB    PDBbind15-mer
1kneRCSB PDB    PDBbind15-mer
1om9RCSB PDB    PDBbind15-mer
1t08RCSB PDB    PDBbind15-mer
1t79RCSB PDB    PDBbind15-mer
1t7fRCSB PDB    PDBbind15-mer
1t7rRCSB PDB    PDBbind15-mer
1tetRCSB PDB    PDBbind15-mer
1w70RCSB PDB    PDBbind15-mer
1xhmRCSB PDB    PDBbind15-mer
2aq9RCSB PDB    PDBbind15-mer
2aucRCSB PDB    PDBbind15-mer
2bbaRCSB PDB    PDBbind15-mer
2co0RCSB PDB    PDBbind15-mer
2d1xRCSB PDB    PDBbind15-mer
2f6jRCSB PDB    PDBbind15-mer
2fsaRCSB PDB    PDBbind15-mer
2fuuRCSB PDB    PDBbind15-mer
2jk9RCSB PDB    PDBbind15-mer
2k00RCSB PDB    PDBbind15-mer
2kspRCSB PDB    PDBbind15-mer
2kwnRCSB PDB    PDBbind15-mer
2l11RCSB PDB    PDBbind15-mer
2l12RCSB PDB    PDBbind15-mer
2l1bRCSB PDB    PDBbind15-mer
2lbmRCSB PDB    PDBbind15-mer
2lgfRCSB PDB    PDBbind15-mer
2ltxRCSB PDB    PDBbind15-mer
2ltyRCSB PDB    PDBbind15-mer
2ltzRCSB PDB    PDBbind15-mer
2m41RCSB PDB    PDBbind15-mer
2mwoRCSB PDB    PDBbind15-mer
2mwyRCSB PDB    PDBbind15-mer
2n9eRCSB PDB    PDBbind15-mer
2pmcRCSB PDB    PDBbind15-mer
2rnwRCSB PDB    PDBbind15-mer
2rnyRCSB PDB    PDBbind15-mer
2vwfRCSB PDB    PDBbind15-mer
2w0pRCSB PDB    PDBbind15-mer
2xxnRCSB PDB    PDBbind15-mer
2z5sRCSB PDB    PDBbind15-mer
2z5tRCSB PDB    PDBbind15-mer
3b95RCSB PDB    PDBbind15-mer
3btrRCSB PDB    PDBbind15-mer
3bu6RCSB PDB    PDBbind15-mer
3cfsRCSB PDB    PDBbind15-mer
3dabRCSB PDB    PDBbind15-mer
3fdtRCSB PDB    PDBbind15-mer
3gheRCSB PDB    PDBbind15-mer
3gv6RCSB PDB    PDBbind15-mer
3h1zRCSB PDB    PDBbind15-mer
3h91RCSB PDB    PDBbind15-mer
3hqhRCSB PDB    PDBbind15-mer
3jpxRCSB PDB    PDBbind15-mer
3l3qRCSB PDB    PDBbind15-mer
3l6fRCSB PDB    PDBbind15-mer
3m17RCSB PDB    PDBbind15-mer
3o6lRCSB PDB    PDBbind15-mer
3ql9RCSB PDB    PDBbind15-mer
3qlcRCSB PDB    PDBbind15-mer
3qo2RCSB PDB    PDBbind15-mer
3qxdRCSB PDB    PDBbind15-mer
3r93RCSB PDB    PDBbind15-mer
3uigRCSB PDB    PDBbind15-mer
3uihRCSB PDB    PDBbind15-mer
3uijRCSB PDB    PDBbind15-mer
3wp0RCSB PDB    PDBbind15-mer
3wsyRCSB PDB    PDBbind15-mer
4b4nRCSB PDB    PDBbind15-mer
4bxuRCSB PDB    PDBbind15-mer
4cy1RCSB PDB    PDBbind15-mer
4dmaRCSB PDB    PDBbind15-mer
4dx9RCSB PDB    PDBbind15-mer
4ezoRCSB PDB    PDBbind15-mer
4ft2RCSB PDB    PDBbind15-mer
4gnfRCSB PDB    PDBbind15-mer
4gngRCSB PDB    PDBbind15-mer
4hfzRCSB PDB    PDBbind15-mer
4iurRCSB PDB    PDBbind15-mer
4iutRCSB PDB    PDBbind15-mer
4iuuRCSB PDB    PDBbind15-mer
4iuvRCSB PDB    PDBbind15-mer
4j8sRCSB PDB    PDBbind15-mer
4k0uRCSB PDB    PDBbind15-mer
4n3wRCSB PDB    PDBbind15-mer
4n5tRCSB PDB    PDBbind15-mer
4nb3RCSB PDB    PDBbind15-mer
4nmxRCSB PDB    PDBbind15-mer
4nw2RCSB PDB    PDBbind15-mer
4o36RCSB PDB    PDBbind15-mer
4o37RCSB PDB    PDBbind15-mer
4o3uRCSB PDB    PDBbind15-mer
4o42RCSB PDB    PDBbind15-mer
4o45RCSB PDB    PDBbind15-mer
4os1RCSB PDB    PDBbind15-mer
4os4RCSB PDB    PDBbind15-mer
4os5RCSB PDB    PDBbind15-mer
4os7RCSB PDB    PDBbind15-mer
4psxRCSB PDB    PDBbind15-mer
4r1eRCSB PDB    PDBbind15-mer
4r3sRCSB PDB    PDBbind15-mer
4rrvRCSB PDB    PDBbind15-mer
4u0aRCSB PDB    PDBbind15-mer
4u0bRCSB PDB    PDBbind15-mer
4u6xRCSB PDB    PDBbind15-mer
4u6yRCSB PDB    PDBbind15-mer
4xynRCSB PDB    PDBbind15-mer
5cfaRCSB PDB    PDBbind15-mer
5cinRCSB PDB    PDBbind15-mer
5cqxRCSB PDB    PDBbind15-mer
5difRCSB PDB    PDBbind15-mer
5eppRCSB PDB    PDBbind15-mer
5etfRCSB PDB    PDBbind15-mer
5fb0RCSB PDB    PDBbind15-mer
5h5qRCSB PDB    PDBbind15-mer
5h5rRCSB PDB    PDBbind15-mer
5ix1RCSB PDB    PDBbind15-mer
5izuRCSB PDB    PDBbind15-mer
5j19RCSB PDB    PDBbind15-mer
5j9kRCSB PDB    PDBbind15-mer
5jlzRCSB PDB    PDBbind15-mer
5ksuRCSB PDB    PDBbind15-mer
5ksvRCSB PDB    PDBbind15-mer
5kzpRCSB PDB    PDBbind15-mer
5laxRCSB PDB    PDBbind15-mer
5mloRCSB PDB    PDBbind15-mer
5o45RCSB PDB    PDBbind15-mer
5svzRCSB PDB    PDBbind15-mer
5t1iRCSB PDB    PDBbind15-mer
5twgRCSB PDB    PDBbind15-mer
5u66RCSB PDB    PDBbind15-mer
5ul6RCSB PDB    PDBbind15-mer
5uwjRCSB PDB    PDBbind15-mer
5v4bRCSB PDB    PDBbind15-mer
5vb9RCSB PDB    PDBbind15-mer
5vzyRCSB PDB    PDBbind15-mer
5wirRCSB PDB    PDBbind15-mer
5ypoRCSB PDB    PDBbind15-mer
5znpRCSB PDB    PDBbind15-mer
5zujRCSB PDB    PDBbind15-mer
6atvRCSB PDB    PDBbind15-mer
6b5mRCSB PDB    PDBbind15-mer
6b5oRCSB PDB    PDBbind15-mer
6b5rRCSB PDB    PDBbind15-mer
6b5tRCSB PDB    PDBbind15-mer
6bizRCSB PDB    PDBbind15-mer
6f0yRCSB PDB    PDBbind15-mer
6rmmRCSB PDB    PDBbind15-mer
6rmlRCSB PDB    PDBbind15-mer
6q9tRCSB PDB    PDBbind15-mer
6holRCSB PDB    PDBbind15-mer
6e5xRCSB PDB    PDBbind15-mer
6bntRCSB PDB    PDBbind15-mer
5zk9RCSB PDB    PDBbind15-mer
5zjzRCSB PDB    PDBbind15-mer
5vtbRCSB PDB    PDBbind15-mer
6a5eRCSB PDB    PDBbind15-mer
Entry Information
PDB ID5fb1
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameNuclear autoantigen Sp100C PHD-Bromo
Ligand Name15-mer
EC.Number E.C.-.-.-.-
Resolution 2.1(Å)
Affinity (Kd/Ki/IC50)Kd=1.2uM
Release Year2016
Protein/NA SequenceCheck fasta file
Primary Reference (2016) J.Biol.Chem. Vol. 291: pp. 12786-12798
Ligand Properties
Formula C37H74N16O12
Molecular Weight 935.083
Exact Mass 934.567
No. of atoms 139
No. of bonds 138
Polar Surface Area 511.85
LOGP Value -4.71      (Computed with XLOGP3)
-6.94      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 12
No. of Hydrogen Bond Acceptors: 12
No. of Rotatable Bonds: 40
No. of Nitrogen and Oxygen Atoms: 28
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P23497  P68431  
Entrez Gene IDNCBI Entrez Gene ID: 6672  8350  8351  8352  8353  8354  8355  8356  8357  8358  8968  
ASDInformation of known allosteric effects of PDB entries
 
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