Browse entries in the PDBbind-CN Database

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Related entries of code: 4gy5
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2b2vRCSB PDB    PDBbind16aa, >2B2V_3|Chain... at 93%
2b2wRCSB PDB    PDBbind20aa, >2B2W_3|Chain... at 95%
2co0RCSB PDB    PDBbind15aa, >2CO0_2|Chains... at 100%
2f6jRCSB PDB    PDBbind15aa, >2F6J_2|Chain... at 100%
2fsaRCSB PDB    PDBbind15aa, >2FSA_2|Chain... at 100%
2fuuRCSB PDB    PDBbind15aa, >2FUU_2|Chain... at 100%
2h2gRCSB PDB    PDBbind11aa, >2H2G_2|Chain... at 100%
2h9mRCSB PDB    PDBbind11aa, >2H9M_2|Chains... at 100%
2h9nRCSB PDB    PDBbind11aa, >2H9N_2|Chains... at 100%
2h9pRCSB PDB    PDBbind11aa, >2H9P_2|Chain... at 100%
2l3rRCSB PDB    PDBbind11aa, >2L3R_2|Chain... at 100%
2lbmRCSB PDB    PDBbind15aa, >2LBM_2|Chain... at 100%
2o9kRCSB PDB    PDBbind11aa, >2O9K_2|Chains... at 100%
2r0yRCSB PDB    PDBbind13aa, >2R0Y_2|Chain... at 100%
2rnwRCSB PDB    PDBbind15aa, >2RNW_2|Chain... at 100%
2rnxRCSB PDB    PDBbind13aa, >2RNX_2|Chain... at 92%
2uxnRCSB PDB    PDBbind21aa, >2UXN_3|Chain... at 95%
2v1dRCSB PDB    PDBbind21aa, >2V1D_3|Chain... at 95%
2ybpRCSB PDB    PDBbind12aa, >2YBP_2|Chains... at 91%
2ybsRCSB PDB    PDBbind12aa, >2YBS_2|Chains... at 91%
3askRCSB PDB    PDBbind13aa, >3ASK_2|Chains... at 100%
3aslRCSB PDB    PDBbind11aa, >3ASL_2|Chain... at 100%
3b95RCSB PDB    PDBbind15aa, >3B95_2|Chain... at 100%
3ij0RCSB PDB    PDBbind11aa, >3IJ0_2|Chain... at 100%
3kv4RCSB PDB    PDBbind24aa, >3KV4_2|Chain... at 95%
3me9RCSB PDB    PDBbind11aa, >3ME9_2|Chains... at 100%
3meaRCSB PDB    PDBbind11aa, >3MEA_2|Chain... at 100%
3metRCSB PDB    PDBbind11aa, >3MET_2|Chains... at 100%
3meuRCSB PDB    PDBbind14aa, >3MEU_2|Chains... at 92%
3ql9RCSB PDB    PDBbind15aa, >3QL9_2|Chain... at 100%
3qlcRCSB PDB    PDBbind15aa, >3QLC_2|Chains... at 100%
3uedRCSB PDB    PDBbind12aa, >3UED_2|Chains... at 100%
3uefRCSB PDB    PDBbind12aa, >3UEF_2|Chains... at 100%
3uigRCSB PDB    PDBbind15aa, >3UIG_2|Chains... at 100%
4a7jRCSB PDB    PDBbind16aa, >4A7J_2|Chain... at 100%
4ft2RCSB PDB    PDBbind15aa, >4FT2_2|Chain... at 100%
4ft4RCSB PDB    PDBbind32aa, >4FT4_2|Chains... at 93%
4qq4RCSB PDB    PDBbind16aa, >4QQ4_2|Chains... at 93%
4tmpRCSB PDB    PDBbind11aa, >4TMP_2|Chains... at 100%
4u7tRCSB PDB    PDBbind12aa, >4U7T_3|Chains... at 100%
4w5aRCSB PDB    PDBbind15aa, >4W5A_2|Chains... at 100%
4yhpRCSB PDB    PDBbind16aa, >4YHP_1|Chains... at 100%
4yhzRCSB PDB    PDBbind12aa, >4YHZ_3|Chain... at 100%
5fb0RCSB PDB    PDBbind15aa, >5FB0_2|Chains... at 100%
5fb1RCSB PDB    PDBbind15aa, >5FB1_2|Chain... at 100%
5ix1RCSB PDB    PDBbind15aa, >5IX1_2|Chains... at 100%
5svxRCSB PDB    PDBbind11aa, >5SVX_2|Chain... at 100%
5svyRCSB PDB    PDBbind11aa, >5SVY_2|Chain... at 100%
5x60RCSB PDB    PDBbind20aa, >5X60_3|Chain... at 90%
5znpRCSB PDB    PDBbind15aa, >5ZNP_2|Chains... at 100%
6bhiRCSB PDB    PDBbind16aa, >6BHI_2|Chain... at 100%
6milRCSB PDB    PDBbind19aa, >6MIL_2|Chains... at 94%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1czqRCSB PDB    PDBbind17-mer
1ej4RCSB PDB    PDBbind17-mer
1f47RCSB PDB    PDBbind17-mer
1i5hRCSB PDB    PDBbind17-mer
1mxlRCSB PDB    PDBbind17-mer
1r2bRCSB PDB    PDBbind17-mer
1yboRCSB PDB    PDBbind17-mer
2br8RCSB PDB    PDBbind17-mer
2fysRCSB PDB    PDBbind17-mer
2jq9RCSB PDB    PDBbind17-mer
2krdRCSB PDB    PDBbind17-mer
2ll6RCSB PDB    PDBbind17-mer
2ll7RCSB PDB    PDBbind17-mer
2n3kRCSB PDB    PDBbind17-mer
2n9xRCSB PDB    PDBbind17-mer
2nm1RCSB PDB    PDBbind17-mer
2oddRCSB PDB    PDBbind17-mer
2r3cRCSB PDB    PDBbind17-mer
2r5bRCSB PDB    PDBbind17-mer
2r5dRCSB PDB    PDBbind17-mer
2uz6RCSB PDB    PDBbind17-mer
2w73RCSB PDB    PDBbind17-mer
2y6sRCSB PDB    PDBbind17-mer
3fdmRCSB PDB    PDBbind17-mer
6s07RCSB PDB    PDBbind17-mer
3ktrRCSB PDB    PDBbind17-mer
3o0eRCSB PDB    PDBbind17-mer
3qn7RCSB PDB    PDBbind17-mer
3t7gRCSB PDB    PDBbind17-mer
3u3fRCSB PDB    PDBbind17-mer
3uxgRCSB PDB    PDBbind17-mer
3uzdRCSB PDB    PDBbind17-mer
3v30RCSB PDB    PDBbind17-mer
3wp1RCSB PDB    PDBbind17-mer
4b60RCSB PDB    PDBbind17-mer
4blbRCSB PDB    PDBbind17-mer
4djsRCSB PDB    PDBbind17-mer
4esgRCSB PDB    PDBbind17-mer
4fmqRCSB PDB    PDBbind17-mer
4i31RCSB PDB    PDBbind17-mer
4i32RCSB PDB    PDBbind17-mer
4i33RCSB PDB    PDBbind17-mer
4j2cRCSB PDB    PDBbind17-mer
4kmdRCSB PDB    PDBbind17-mer
4lg6RCSB PDB    PDBbind17-mer
4nghRCSB PDB    PDBbind17-mer
4nhcRCSB PDB    PDBbind17-mer
4odnRCSB PDB    PDBbind17-mer
4qqiRCSB PDB    PDBbind17-mer
4tzqRCSB PDB    PDBbind17-mer
4u0cRCSB PDB    PDBbind17-mer
4u0dRCSB PDB    PDBbind17-mer
4uu5RCSB PDB    PDBbind17-mer
4wymRCSB PDB    PDBbind17-mer
4z88RCSB PDB    PDBbind17-mer
4z89RCSB PDB    PDBbind17-mer
4z8aRCSB PDB    PDBbind17-mer
5ajoRCSB PDB    PDBbind17-mer
5ajpRCSB PDB    PDBbind17-mer
5fosRCSB PDB    PDBbind17-mer
5hogRCSB PDB    PDBbind17-mer
5i22RCSB PDB    PDBbind17-mer
5ixtRCSB PDB    PDBbind17-mer
5j3vRCSB PDB    PDBbind17-mer
5twhRCSB PDB    PDBbind17-mer
5vlpRCSB PDB    PDBbind17-mer
5vzuRCSB PDB    PDBbind17-mer
5xglRCSB PDB    PDBbind17-mer
5xxfRCSB PDB    PDBbind17-mer
5ycoRCSB PDB    PDBbind17-mer
5znrRCSB PDB    PDBbind17-mer
6a6wRCSB PDB    PDBbind17-mer
6e49RCSB PDB    PDBbind17-mer
6f6dRCSB PDB    PDBbind17-mer
6rjpRCSB PDB    PDBbind17-mer
6qtmRCSB PDB    PDBbind17-mer
6q36RCSB PDB    PDBbind17-mer
6njzRCSB PDB    PDBbind17-mer
6kmjRCSB PDB    PDBbind17-mer
6datRCSB PDB    PDBbind17-mer
6da1RCSB PDB    PDBbind17-mer
5zk5RCSB PDB    PDBbind17-mer
5oy3RCSB PDB    PDBbind17-mer
6uyxRCSB PDB    PDBbind17-mer
6uyyRCSB PDB    PDBbind17-mer
6uyzRCSB PDB    PDBbind17-mer
Entry Information
PDB ID4gy5
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameE3 ubiquitin-protein ligase UHRF1
Ligand Name17-mer
EC.Number E.C.6.3.2
Resolution 2.96(Å)
Affinity (Kd/Ki/IC50)Kd=0.15uM
Release Year2012
Protein/NA SequenceCheck fasta file
Primary Reference (2012) J.Biol.Chem.
Ligand Properties
Formula C49H98N19O15
Molecular Weight 1193.420
Exact Mass 1192.750
No. of atoms 181
No. of bonds 180
Polar Surface Area 590.28
LOGP Value -5.51      (Computed with XLOGP3)
-7.32      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 15
No. of Hydrogen Bond Acceptors: 15
No. of Rotatable Bonds: 53
No. of Nitrogen and Oxygen Atoms: 34
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q96T88  P84243  
Entrez Gene IDNCBI Entrez Gene ID: 29128  3020  3021  
ASDInformation of known allosteric effects of PDB entries
 
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