Browse entries in the PDBbind-CN Database

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Related entries of code: 2clv
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1fo0RCSB PDB    PDBbind99aa, >1FO0_2|Chain... at 98%
1fzjRCSB PDB    PDBbind99aa, >1FZJ_2|Chain... at 98%
1fzkRCSB PDB    PDBbind99aa, >1FZK_2|Chain... at 98%
1fzmRCSB PDB    PDBbind99aa, >1FZM_2|Chain... at 98%
1fzoRCSB PDB    PDBbind99aa, >1FZO_2|Chain... at 98%
1g6rRCSB PDB    PDBbind99aa, >1G6R_4|Chains... at 98%
1g7pRCSB PDB    PDBbind99aa, >1G7P_2|Chain... at 98%
1g7qRCSB PDB    PDBbind99aa, >1G7Q_2|Chain... at 98%
1inqRCSB PDB    PDBbind99aa, >1INQ_2|Chain... at 98%
1jufRCSB PDB    PDBbind99aa, >1JUF_2|Chain... at 98%
1legRCSB PDB    PDBbind99aa, >1LEG_2|Chain... at 98%
1lekRCSB PDB    PDBbind99aa, >1LEK_2|Chain... at 98%
1nezRCSB PDB    PDBbind99aa, >1NEZ_2|Chain... at 98%
1p1zRCSB PDB    PDBbind99aa, >1P1Z_2|Chain... at 98%
1p4lRCSB PDB    PDBbind99aa, >1P4L_2|Chain... at 100%
2fo4RCSB PDB    PDBbind99aa, >2FO4_2|Chain... at 98%
2q7yRCSB PDB    PDBbind99aa, >2Q7Y_2|Chains... at 100%
3arbRCSB PDB    PDBbind99aa, >3ARB_2|Chain... at 100%
3ardRCSB PDB    PDBbind99aa, >3ARD_2|Chain... at 100%
3areRCSB PDB    PDBbind99aa, >3ARE_2|Chain... at 100%
3arfRCSB PDB    PDBbind99aa, >3ARF_2|Chain... at 100%
3argRCSB PDB    PDBbind99aa, >3ARG_2|Chain... at 100%
3c8kRCSB PDB    PDBbind99aa, >3C8K_2|Chain... at 100%
3dmmRCSB PDB    PDBbind100aa, >3DMM_2|Chain... *
3g08RCSB PDB    PDBbind99aa, >3G08_2|Chain... at 100%
3he6RCSB PDB    PDBbind99aa, >3HE6_2|Chain... at 100%
3he7RCSB PDB    PDBbind99aa, >3HE7_2|Chain... at 100%
3ilqRCSB PDB    PDBbind99aa, >3ILQ_2|Chain... at 100%
3o8xRCSB PDB    PDBbind99aa, >3O8X_2|Chain... at 100%
3o9wRCSB PDB    PDBbind99aa, >3O9W_2|Chain... at 100%
3p9lRCSB PDB    PDBbind99aa, >3P9L_2|Chains... at 98%
3p9mRCSB PDB    PDBbind99aa, >3P9M_2|Chains... at 98%
3pabRCSB PDB    PDBbind99aa, >3PAB_2|Chains... at 98%
3quxRCSB PDB    PDBbind99aa, >3QUX_2|Chain... at 100%
3quyRCSB PDB    PDBbind99aa, >3QUY_2|Chain... at 100%
3quzRCSB PDB    PDBbind99aa, >3QUZ_2|Chain... at 100%
3rtqRCSB PDB    PDBbind99aa, >3RTQ_2|Chain... at 100%
3rugRCSB PDB    PDBbind99aa, >3RUG_2|Chains... at 100%
3rzcRCSB PDB    PDBbind99aa, >3RZC_2|Chain... at 100%
3scmRCSB PDB    PDBbind99aa, >3SCM_2|Chain... at 100%
3sdaRCSB PDB    PDBbind99aa, >3SDA_2|Chain... at 100%
3sdcRCSB PDB    PDBbind99aa, >3SDC_2|Chain... at 100%
3sddRCSB PDB    PDBbind99aa, >3SDD_2|Chain... at 100%
3tn0RCSB PDB    PDBbind99aa, >3TN0_2|Chain... at 100%
3to4RCSB PDB    PDBbind99aa, >3TO4_2|Chain... at 100%
3tvmRCSB PDB    PDBbind99aa, >3TVM_2|Chains... at 100%
3ubxRCSB PDB    PDBbind99aa, >3UBX_2|Chains... at 100%
4ei5RCSB PDB    PDBbind99aa, >4EI5_2|Chains... at 100%
4elmRCSB PDB    PDBbind99aa, >4ELM_2|Chains... at 100%
4ihoRCSB PDB    PDBbind99aa, >4IHO_2|Chains... at 98%
4pg9RCSB PDB    PDBbind100aa, >4PG9_2|Chain... at 99%
4pgbRCSB PDB    PDBbind100aa, >4PGB_2|Chains... at 99%
4pgdRCSB PDB    PDBbind100aa, >4PGD_2|Chain... at 99%
4pgeRCSB PDB    PDBbind100aa, >4PGE_2|Chain... at 99%
4y16RCSB PDB    PDBbind99aa, >4Y16_2|Chain... at 100%
4zakRCSB PDB    PDBbind99aa, >4ZAK_2|Chain... at 100%
5ivxRCSB PDB    PDBbind100aa, >5IVX_2|Chain... at 100%
5swsRCSB PDB    PDBbind99aa, >5SWS_2|Chain... at 100%
5swzRCSB PDB    PDBbind99aa, >5SWZ_2|Chains... at 100%
5tw2RCSB PDB    PDBbind99aa, >5TW2_2|Chain... at 100%
5tw5RCSB PDB    PDBbind97aa, >5TW5_2|Chain... at 100%
6bnkRCSB PDB    PDBbind99aa, >6BNK_2|Chains... at 100%
6bnlRCSB PDB    PDBbind99aa, >6BNL_2|Chains... at 100%
6oorRCSB PDB    PDBbind99aa, >6OOR_2|Chain... at 100%
6mssRCSB PDB    PDBbind99aa, >6MSS_4|Chain... at 100%
6mjjRCSB PDB    PDBbind99aa, >6MJJ_4|Chain... at 100%
6mjiRCSB PDB    PDBbind99aa, >6MJI_4|Chain... at 100%
6mjaRCSB PDB    PDBbind99aa, >6MJA_4|Chain... at 100%
6mj4RCSB PDB    PDBbind99aa, >6MJ4_4|Chain... at 100%
6miyRCSB PDB    PDBbind99aa, >6MIY_4|Chains... at 100%
6mivRCSB PDB    PDBbind99aa, >6MIV_4|Chain... at 100%
6cxfRCSB PDB    PDBbind98aa, >6CXF_2|Chain... at 100%
5wlgRCSB PDB    PDBbind99aa, >5WLG_2|Chains... at 100%
6mjqRCSB PDB    PDBbind99aa, >6MJQ_4|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1fo0RCSB PDB    PDBbind8-mer
1fzjRCSB PDB    PDBbind8-mer
1fzmRCSB PDB    PDBbind8-mer
1g6rRCSB PDB    PDBbind8-mer
1g7qRCSB PDB    PDBbind8-mer
1legRCSB PDB    PDBbind8-mer
1lekRCSB PDB    PDBbind8-mer
1nlpRCSB PDB    PDBbind8-mer
1nzlRCSB PDB    PDBbind8-mer
1nzvRCSB PDB    PDBbind8-mer
1obxRCSB PDB    PDBbind8-mer
1okxRCSB PDB    PDBbind8-mer
1p2gRCSB PDB    PDBbind8-mer
1pigRCSB PDB    PDBbind8-mer
1pz5RCSB PDB    PDBbind8-mer
1qjaRCSB PDB    PDBbind8-mer
1qjbRCSB PDB    PDBbind8-mer
1qr3RCSB PDB    PDBbind8-mer
1sleRCSB PDB    PDBbind8-mer
1tpsRCSB PDB    PDBbind8-mer
2c1nRCSB PDB    PDBbind8-mer
2er0RCSB PDB    PDBbind8-mer
2er9RCSB PDB    PDBbind8-mer
2fo4RCSB PDB    PDBbind8-mer
2h6kRCSB PDB    PDBbind8-mer
2kbsRCSB PDB    PDBbind8-mer
2qbwRCSB PDB    PDBbind8-mer
2r03RCSB PDB    PDBbind8-mer
2r9bRCSB PDB    PDBbind8-mer
2rlyRCSB PDB    PDBbind8-mer
2rt5RCSB PDB    PDBbind8-mer
2v88RCSB PDB    PDBbind8-mer
2w16RCSB PDB    PDBbind8-mer
2w3oRCSB PDB    PDBbind8-mer
2ynnRCSB PDB    PDBbind8-mer
2zpkRCSB PDB    PDBbind8-mer
3agmRCSB PDB    PDBbind8-mer
3av9RCSB PDB    PDBbind8-mer
3avaRCSB PDB    PDBbind8-mer
3avbRCSB PDB    PDBbind8-mer
3avfRCSB PDB    PDBbind8-mer
3avgRCSB PDB    PDBbind8-mer
3avhRCSB PDB    PDBbind8-mer
3aviRCSB PDB    PDBbind8-mer
3avjRCSB PDB    PDBbind8-mer
3avkRCSB PDB    PDBbind8-mer
3avlRCSB PDB    PDBbind8-mer
3avmRCSB PDB    PDBbind8-mer
3avnRCSB PDB    PDBbind8-mer
3drfRCSB PDB    PDBbind8-mer
3ds9RCSB PDB    PDBbind8-mer
3eyuRCSB PDB    PDBbind8-mer
3h85RCSB PDB    PDBbind8-mer
3i91RCSB PDB    PDBbind8-mer
3jvkRCSB PDB    PDBbind8-mer
3kzeRCSB PDB    PDBbind8-mer
3mukRCSB PDB    PDBbind8-mer
3n5eRCSB PDB    PDBbind8-mer
3nf3RCSB PDB    PDBbind8-mer
3omcRCSB PDB    PDBbind8-mer
3omgRCSB PDB    PDBbind8-mer
3p9lRCSB PDB    PDBbind8-mer
3p9mRCSB PDB    PDBbind8-mer
3pabRCSB PDB    PDBbind8-mer
3qg6RCSB PDB    PDBbind8-mer
3rdvRCSB PDB    PDBbind8-mer
3rwhRCSB PDB    PDBbind8-mer
3rwjRCSB PDB    PDBbind8-mer
3unnRCSB PDB    PDBbind8-mer
3uqpRCSB PDB    PDBbind8-mer
3uriRCSB PDB    PDBbind8-mer
3uyrRCSB PDB    PDBbind8-mer
3zevRCSB PDB    PDBbind8-mer
3zvyRCSB PDB    PDBbind8-mer
3zyrRCSB PDB    PDBbind8-mer
4aa1RCSB PDB    PDBbind8-mer
4aphRCSB PDB    PDBbind8-mer
4aprRCSB PDB    PDBbind8-mer
4dv9RCSB PDB    PDBbind8-mer
4e67RCSB PDB    PDBbind8-mer
4eoyRCSB PDB    PDBbind8-mer
4ep2RCSB PDB    PDBbind8-mer
4eqjRCSB PDB    PDBbind8-mer
4ezrRCSB PDB    PDBbind8-mer
4fmoRCSB PDB    PDBbind8-mer
4fn5RCSB PDB    PDBbind8-mer
4gpkRCSB PDB    PDBbind8-mer
4gvcRCSB PDB    PDBbind8-mer
4gvdRCSB PDB    PDBbind8-mer
4gvuRCSB PDB    PDBbind8-mer
4h36RCSB PDB    PDBbind8-mer
4h75RCSB PDB    PDBbind8-mer
4ii9RCSB PDB    PDBbind8-mer
4jizRCSB PDB    PDBbind8-mer
4lklRCSB PDB    PDBbind8-mer
4lkmRCSB PDB    PDBbind8-mer
4mjiRCSB PDB    PDBbind8-mer
4nxqRCSB PDB    PDBbind8-mer
4nxrRCSB PDB    PDBbind8-mer
4o2fRCSB PDB    PDBbind8-mer
4rxhRCSB PDB    PDBbind8-mer
4y7rRCSB PDB    PDBbind8-mer
4ysiRCSB PDB    PDBbind8-mer
5d7eRCSB PDB    PDBbind8-mer
5e2qRCSB PDB    PDBbind8-mer
5elqRCSB PDB    PDBbind8-mer
5em9RCSB PDB    PDBbind8-mer
5emaRCSB PDB    PDBbind8-mer
5embRCSB PDB    PDBbind8-mer
5fjxRCSB PDB    PDBbind8-mer
5fpiRCSB PDB    PDBbind8-mer
5gmvRCSB PDB    PDBbind8-mer
5hjbRCSB PDB    PDBbind8-mer
5i25RCSB PDB    PDBbind8-mer
5iokRCSB PDB    PDBbind8-mer
5iqlRCSB PDB    PDBbind8-mer
5jjmRCSB PDB    PDBbind8-mer
5mgxRCSB PDB    PDBbind8-mer
5n70RCSB PDB    PDBbind8-mer
5sviRCSB PDB    PDBbind8-mer
5sxmRCSB PDB    PDBbind8-mer
5t6pRCSB PDB    PDBbind8-mer
5t78RCSB PDB    PDBbind8-mer
5tegRCSB PDB    PDBbind8-mer
5tkjRCSB PDB    PDBbind8-mer
5tkkRCSB PDB    PDBbind8-mer
5vwiRCSB PDB    PDBbind8-mer
5vwkRCSB PDB    PDBbind8-mer
5wouRCSB PDB    PDBbind8-mer
5wttRCSB PDB    PDBbind8-mer
5xjmRCSB PDB    PDBbind8-mer
5xn3RCSB PDB    PDBbind8-mer
5ybaRCSB PDB    PDBbind8-mer
6cdmRCSB PDB    PDBbind8-mer
6cdoRCSB PDB    PDBbind8-mer
6cdpRCSB PDB    PDBbind8-mer
6e86RCSB PDB    PDBbind8-mer
6ewwRCSB PDB    PDBbind8-mer
6fauRCSB PDB    PDBbind8-mer
6favRCSB PDB    PDBbind8-mer
6fawRCSB PDB    PDBbind8-mer
6fbwRCSB PDB    PDBbind8-mer
6fbyRCSB PDB    PDBbind8-mer
6felRCSB PDB    PDBbind8-mer
6fi4RCSB PDB    PDBbind8-mer
6fi5RCSB PDB    PDBbind8-mer
6fmpRCSB PDB    PDBbind8-mer
6fx1RCSB PDB    PDBbind8-mer
6hpgRCSB PDB    PDBbind8-mer
6minRCSB PDB    PDBbind8-mer
6miqRCSB PDB    PDBbind8-mer
6q3qRCSB PDB    PDBbind8-mer
6r0xRCSB PDB    PDBbind8-mer
6qk8RCSB PDB    PDBbind8-mer
6q4qRCSB PDB    PDBbind8-mer
6mtvRCSB PDB    PDBbind8-mer
6mtuRCSB PDB    PDBbind8-mer
6ms1RCSB PDB    PDBbind8-mer
6mqeRCSB PDB    PDBbind8-mer
6mqcRCSB PDB    PDBbind8-mer
6jaxRCSB PDB    PDBbind8-mer
6hmtRCSB PDB    PDBbind8-mer
6hhpRCSB PDB    PDBbind8-mer
6dtnRCSB PDB    PDBbind8-mer
6dqlRCSB PDB    PDBbind8-mer
6do1RCSB PDB    PDBbind8-mer
Entry Information
PDB ID2clv
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameh-2 class i histocompatibility antigen, k-b
Ligand Name8-mer
EC.Number E.C.-.-.-.-
Resolution 1.9(Å)
Affinity (Kd/Ki/IC50)Kd=13.2nM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference Eur.J.Immunol.v36;pp.1856
Ligand Properties
Formula C48H65N10O16
Molecular Weight 1038.090
Exact Mass 1037.460
No. of atoms 139
No. of bonds 141
Polar Surface Area 455.97
LOGP Value -3.65      (Computed with XLOGP3)
-0.77      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 15
No. of Hydrogen Bond Acceptors: 16
No. of Rotatable Bonds: 41
No. of Nitrogen and Oxygen Atoms: 26
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q91YE7  P01901  P01887  
Entrez Gene IDNCBI Entrez Gene ID: 83486  14972  12010  
ASDInformation of known allosteric effects of PDB entries
 
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